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  1. 47 Acta Palaeontologica Polonica
  2. 37 Acta Protozoologica
  3. 25 Annales Zoologici
  4. 22 Acta Parasitologica
  5. 12 Acta Zoologica Cracoviensia
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  1. 1 2023
  2. 1 2022
  3. 4 2021
  4. 2 2020
  5. 3 2019
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  1. 6 Bilinski S. M.
  2. 6 Lis J. A.
  3. 6 Song W.
  4. 5 Falniowski A.
  5. 5 Stebnicka Z.
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1
Associative genetic diversity of RoTat 1.2 VSG in different Trypanosoma evansi isolates
100%
Gaur R. S. , Shanker D. , Sudan V. , Paliwal S. , Singh S. , Jadaun A.
Acta Parasitologica
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2021
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tom 66
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nr 1
2
Phylogenetic analysis of the Amphipoda, with special emphasis on the origin of the Stegocephalidae
100%
Berge J. , Boxshall G. , Vader W.
Polskie Archiwum Hydrobiologii
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2000
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tom 47
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nr 3-4
3
Content available Taxonomic status of Galeobdolon luteum Huds. (Lamiaceae) from classical taxonomy and phylogenetics perspectives
88%
Krawczyk K. , Korniak T. , Sawicki J.
Acta Biologica Cracoviensia. Series Botanica
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2013
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tom 55
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nr 2
4
Content available Genetic approach to systematics and phylogeny of Echinostomatidae
88%
Grabda-Kazubska B. , Laskowski Z. , Borsuk P.
Wiadomości Parazytologiczne
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1998
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tom 44
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nr 3
5
Content available remote Phylogenetic and variability study on all known hemagglutinin subtypes of influenza A virus
75%
Filip R. , Leluk J.
Bio-Algorithms and Med-Systems
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2017
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tom Vol. 13, no. 3
153--159
EN
Hemagglutinin (HA) is a surface glycoprotein found in influenza viruses. This particle plays two crucial functions in the viral life cycle: it allows for the attachment of the virus into the host cell and participates in the fusion of the virus and host membranes. There are 18 different subtypes of HA. Recently, the H17 and H18 strains have been discovered whose hosts were bats. The evolution of these two strains had most likely occurred in isolation for a long period of time. This work presents the phylogenetic analysis and study on mutational variability based on sequences from all 18 currently known HA strains belonging to influenza virus type A. The results have been presented regarding the current knowledge about influenza. The classical software (Clustal, PHYLIP, and ConSurf) as well as original applications (SSSSg and Consensus Constructor) have been used in this research.
6
Content available The PhyloCode, or alternative nomenclature: Why it is not beneficial to palaeontology, either
75%
Monsch K. A.
Acta Palaeontologica Polonica
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2006
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tom 51
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nr 3
EN
Methodological stability in biological nomenclature is being upset recently, with potential consequences for palaeontology. Some systematists, inspired mainly by de Queiroz and Gauthier (1990, 1992, 1994), reject traditional nomenclature in favour of an alternative “Phylogenetic Nomenclature” (PN). Following de Queiroz (2006) I consistently call this Phylogenetic Nomenclature, rather than Phylogenetic taxonomy, as it is often done. Important tenets of PN are the abandonment of hierarchic ranks and binomial names, and establishing name definitions based on cladogram shape (node−, stem−, and stem−modified node−based definitions), apomorphies (apomorphy−based definitions), or a combination of apomorphies and tree topology (apomorphy−modified node−based definition). For an explanation of such definitions, see Cantino and de Queiroz (2003) and Sereno (2005). The practice of Phylogenetic Nomenclature is laid out in an Internet document, the PhyloCode (Cantino and de Queiroz 2003). PN is seen as the natural next step in the evolution of taxonomy: from Linnaeus’ (1753, 1758) “creationist taxonomy” to Hennig’s (1966) cladistic taxonomy. Hence, Linnaeus’ ideas should be removed from nomenclature, which will then reflect phylogeny. Despite the dominance of cladistics as a framework for taxonomy, the validity of its philosophies and methodologies are still questioned (e.g., Szalay 2000). I encourage everyone, independently of school of taxonomy adhered to, to take interest in PN, because: (1) we are all creators or users of taxonomies and classifications, (2) PN is radically different from the current standard, (3) the Preface to the PhyloCode suggests it should ultimately replace the current Codes of Nomenclature (of bacteria, LaPage et al. 1992; of Zoology, ICZN 1999; of Botany, Greuter et al. 2000). I argue herein, why palaeontologists should not follow PN.
7
A study on the phylogeny and phylogeography of a marine cosmopolite diatom from the Southern Black Sea
75%
Baytut O.
Oceanological and Hydrobiological Studies
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2013
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tom 42
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nr 4
8
Content available remote Comparative studies on variability, phylogenesis, and correlated mutations of neuraminidases from influenza virus type A
75%
Filip R. , Leluk J.
Bio-Algorithms and Med-Systems
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2018
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tom Vol. 14, no. 1
art. no. 20170030
EN
Neuraminidase (NA) is an important protein for the replication cycle of influenza A viruses. NA is an enzyme that cleaves the sialic acid receptors; this process plays a significant role in viral life cycle. Blocking NA with a specific inhibitor is an effective way to treat the flu. However, some strains show resistance to current drugs. Therefore, NA is the focus for the intense research for new antiviral drugs and also for the explanation of the functions of new mutations. This research focuses on determining the profile of variability and phylogenetic analysis and finding the correlated mutations within a set of 149 sequences of NA belonging to various strains of influenza A virus. In this study, we have used the original programs (Corm, Consensus Constructor, and SSSSg) and also other bioinformatics software. NA proteins are characterized by various levels of variability in different regions, which was presented in detail with the aid of ConSurf. The use of four independent methods to create the phylogenetic trees gave some new data on the evolutionary relationship within the NA family proteins. The search for correlated mutations shows several potentially important correlated positions that were not reported previously to be significant. The use of such an approach can be potentially important and gives new information regarding NA proteins of influenza A virus.
9
Ultrastructural studies on a model tintinnid – Schmidingerella meunieri (Kofoid and Campbell, 1929) Agatha and Struder-Kypke, 2012 (Ciliophora). I. Somatic kinetids with unique ultrastructure
75%
Gruber M. S. , Muhlthaler A. , Agatha S.
Acta Protozoologica
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2018
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tom 57
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nr 3
10
Content available MIPS sequences: a promising molecular consideration in angiosperm phylogeny and systematics
75%
Hazra A. , Nandy P. , Sengupta C. , Das S.
BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology
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2018
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tom 99
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nr 1
11
Content available remote Students’ Conception of a Point and its Relation to a Straght Line : A Comparison of Phylogenesis and Ontogenesis
75%
Prokopová M.
Scientific Issues of Jan Długosz University in Częstochowa. Mathematics
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2003
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tom Vol. 9
179--185
EN
A point and a straight line are fundamental objects of Euclidean geometry which is taught at basic and secondary schools. Philosophers meditated on the nature of a point and a straight line long before Euclid (from the 6th century BC). But it was Euclid (about 325-265 BC) who delimited the concept of a point and a straight line (and others) in the First book of his Elements (Stocheia) by means of a definition. The phylogenesis of a point and its relation to a straight line is marked out by names such as Viéte, Kepler, Leibniz, Newton, Bolzano and Cantor. Students meet the concept of a point before they start to create their geometrical structures. Our analysis will try to show that there is a strong parallel between the ontogenetic and phylogenetic aspects of the conception of a point and its relation to a straight line, a ray and/or a segment.
12
Molecular identification of Paramecium bursaria syngens and studies on geographic distribution using mitochondrial cytochrome C oxidase subunit I (COI)
75%
Zagata P. , Greczek-Stachura M. , Tarcz S. , Rautian M.
Folia Biologica
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2015
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tom 63
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nr 1
13
Broad taxon sampling of ciliates using mitochondrial small subunit ribosomal DNA
75%
Dunthorn M. , Hall M. , Foissner W. , Stoeck T. , Katz A.
Acta Protozoologica
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2014
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tom 53
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nr 2
14
New Neotropical taxa, synonymical clarifications and phylogeny of Odontolochini on the world basis (Coleoptera: Scarabaeidae: Aphodiinae)
75%
Stebnicka Z. T. , Galante E.
Acta Zoologica Cracoviensia. Ser.B Invertebrata
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2007
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tom 50B
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nr 2
15
Content available Antimicrobial activities and phylogenetic study of Erythrina senegalensis DC (Fabaceae) seed lectin
75%
Enoma S. , Adewole T. S. , Agunbiade T. O. , Kuku A.
BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology
|
2023
|
tom 104
|
nr 1
16
Studies on six Euplotes spp. [Ciliophora: Hypotrichida] using RAPD fingerprinting, including a comparison with morphometric analyses
75%
Chen Z. , Song W. , Warren A.
Acta Protozoologica
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2000
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tom 39
|
nr 3
17
Phylogeny and genetic variation of the European bison Bison bonasus based on mitochondrial DNA D-loop sequences
75%
Burzynska B. , Olech W. , Topczewski J.
|
|
tom 44
|
nr 3
EN
Genomic DNA from 14 representative animals of 3 maternal lines of Bison bonasus (Linnaeus, 1758) was used for amplification of a 1026-bp fragment of mtDNA D-loop. Analysis of this mitochondria! control region demonstrated only four variable sites in the studied B. bonasus population. Nucleotide substitutions in the fragment studied were very unstable, suggesting that intralineage sequence variation can occur in B. bonasus. To estimate phylogenetic relationships within the Bouinae subfamily mtDNA control region was analysed. The phylogenetic analysis separated two species of Bison, and placed Bison bison most closely to Bos grunniens. The rate sequence divergence of the hypervariable region of the D-loop between B. bonasus and B. bison was calculated as 78.5% per Myr.
18
Phylogeny and classification of Tipulomorpha, with special emphasis on the family Limoniidae
75%
Stary J.
Acta Zoologica Cracoviensia
|
1992-1993
|
tom 35
|
nr 1
19
A fragment of the mitochondrial 16S rRNA gene as a molecular marker in phylogenetic studies on feather mites
75%
Dabert M.
Genus. International Journal of Invertebrate Taxonomy
|
1997
|
tom 08
|
nr 3-4
20
Content available Implication of Phyllobothrium lactuca [Cestoda, Tetraphyllidea, Phyllobothriidae] spermiogenesis on phylogenesis within the Tetraphyllidea
75%
Sene A. , Ba C. T. , Miquel J. , Marchand B.
Wiadomości Parazytologiczne
|
1998
|
tom 44
|
nr 3
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