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2 Biocybernetics and Biomedical Engineering

2 2021

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w słowach kluczowych: diagnoza COVID-19

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AutoCovNet: Unsupervised feature learning using autoencoder and feature merging for detection of COVID-19 from chest X-ray images

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Rashid N. , Hossain M. A. F. , Ali M. , Islam Sukanya M. , Mahmud T. , Fattah S. A.

2021

tom Vol. 41, no. 4

1685--1701

With the onset of the COVID-19 pandemic, the automated diagnosis has become one of the most trending topics of research for faster mass screening. Deep learning-based approaches have been established as the most promising methods in this regard. However, the limitation of the labeled data is the main bottleneck of the data-hungry deep learning methods. In this paper, a two-stage deep CNN based scheme is proposed to detect COVID-19 from chest X-ray images for achieving optimum performance with limited training images. In the first stage, an encoder-decoder based autoencoder network is proposed, trained on chest X-ray images in an unsupervised manner, and the network learns to reconstruct the X-ray images. An encoder-merging network is proposed for the second stage that consists of different layers of the encoder model followed by a merging network. Here the encoder model is initialized with the weights learned on the first stage and the outputs from different layers of the encoder model are used effectively by being connected to a proposed merging network. An intelligent feature merging scheme is introduced in the proposed merging network. Finally, the encoder-merging network is trained for feature extraction of the X-ray images in a supervised manner and resulting features are used in the classification layers of the proposed architecture. Considering the final classification task, an EfficientNet-B4 network is utilized in both stages. An end to end training is performed for datasets containing classes: COVID-19, Normal, Bacterial Pneumonia, Viral Pneumonia. The proposed method offers very satisfactory performances compared to the state of the art methods and achieves an accuracy of 90:13% on the 4-class, 96:45% on a 3-class, and 99:39% on 2-class classification.

FractalCovNet architecture for COVID-19 Chest X-ray image Classification and CT-scan image Segmentation

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Munusamy H. , Karthikeyan J. M. , Shriram G. , Thanga Revathi S. , Aravindkumar S.

2021

tom Vol. 41, no. 3

1025--1038

Precise and fast diagnosis of COVID-19 cases play a vital role in early stage of medical treatment and prevention. Automatic detection of COVID-19 cases using the chest X-ray images and chest CT-scan images will be helpful to reduce the impact of this pandemic on the human society. We have developed a novel FractalCovNet architecture using Fractal blocks and U-Net for segmentation of chest CT-scan images to localize the lesion region. The same FractalCovNet architecture is also used for classification of chest X-ray images using transfer learning. We have compared the segmentation results using various model such as UNet, DenseUNet, Segnet, ResnetUNet, and FCN. We have also compared the classification results with various models like ResNet5-, Xception, InceptionResNetV2, VGG-16 and DenseNet architectures. The proposed FractalCovNet model is able to predict the COVID-19 lesion with high F-measure and precision values compared to the other state-of-the-art methods. Thus the proposed model can accurately predict the COVID-19 cases and discover lesion regions in chest CT without the manual annotations of lesions for every suspected individual. An easily-trained and high-performance deep learning model provides a fast way to identify COVID-19 patients, which is beneficial to control the outbreak of SARS-IICOV.