A consensus map of chromosome 6R in rye [Secale cereale L.]

• Autorzy: Stojalowski S , Myskow B. , Milczarski P. , Masojc P.
• Języki publikacji: EN

Abstrakty

EN

Four F2 mapping populations derived from crosses between rye inbred lines DS2×RXL10, 541×Ot1-3, S120×S76 and 544×Ot0-20 were used to develop a consensus map of chromosome 6R. Thirteen marker loci that were polymorphic in more than one mapping population constituted the basis for the alignment of the four maps using the JoinMap v. 3.0 software package. The consensus map consists of 104 molecular marker loci including RFLPs, RAPDs, AFLPs, SSRs, ISSRs, SCARs, STSs and isozymes. The average distance between the marker loci is 1.3 cM, and the total map length is 135.5 cM. This consensus map may be used as a source of molecular markers for the rapid development of new maps of chromosome 6R in any mapping population.

Słowa kluczowe

EN

consensus map; 6R chromosome; rye; Secale cereale; molecular marker; inbred line; cross

• Wydawca: -
• Czasopismo: Cellular and Molecular Biology Letters
• Rocznik: 2009
• Tom: 14
• Numer: 2
• Strony: 190-198
• Opis fizyczny: p.190-198,fig.,ref.

Twórcy

autor

Stojalowski S

• Agricultural University, Slowackiego 17, 71-434 Szczecin, Poland

autor

Myskow B.

autor

Milczarski P.

autor

Masojc P.

Bibliografia

• 1. Geiger, H.H. Strategies of hybrid rye breeding. Vortr. Pflanzenzüchtg. 71 (2007) 1-5.
• 2. Devos, K.M., Atkinson, M.D., Chinoy, C.N., Francis, H.A., Harcourt, R.L., Koebner, R.M.D., Liu, C.J., Masojć, P., Xie, D.X. and Gale, M.D. Chromosomal rearrangements in the rye genome relative to that of wheat. Theor. Appl. Genet. 85 (1993) 673-680.
• 3. Philipp, U., Wehling, P. and Wricke, G. A linkage map of rye. Theor. Appl. Genet. 88 (1994) 243-248.
• 4. Loarce, Y., Hueros, G. and Ferrer, E. A molecular linkage map of rye. Theor. Appl. Genet. 93 (1996) 1112-1118.
• 5. Korzun, V., Malyshev, S., Kartel, N., Westermann, T., Weber, W.E. and Börner, A. A genetic linkage map of rye (Secale cereale L.). Theor. Appl. Genet. 96 (1998) 203-208.
• 6. Börner, A. and Korzun, V. A consensus linkage map of rye (Secale cereale L.) including 374 RFLPs, 24 isozymes and 15 gene loci. Theor. Appl. Genet. 97 (1998) 1279-1288.
• 7. Korzun, V., Malyshev, S., Voylokov, A.V. and Börner, A. A genetic map of rye (Secale cereale L.) combining RFLP, isozyme, protein, microsatellite and gene loci. Theor. Appl. Genet. 102 (2001) 709-717.
• 8. Saal, B. and Wricke, G. Clustering of amplified fragment lenght polymorphism markers in a linkage map of rye (Secale cereale L.). Plant Breed. 121 (2002) 117-123.
• 9. Senft, P. and Wricke, G. An extended genetic map of rye (Secale cereale L.). Plant Breed. 115 (1996) 508-510.
• 10. Ma, X-F, Wanous, M.K., Houchins, K., Rodriguez Milla, M.A., Goicoechea, P.G. and Wang Z., Molecular linkage mapping in rye (Secale cereale L.). Theor. Appl. Genet. 102 (2001) 517–523.
• 11. Hackauf , B. and Wehling, P. Development of microsatellite markers in rye: map construction. Plant Breed. Seed Sci. 48 (2003) 143-151.
• 12. Khlestkina, E.K., Than, M.H.M., Pestsova, E.G., Röder, M.S., Malyshev, S.V., Korzun, V. and Börner A. Mapping of 99 new microsatellite-derived loci in rye (Secale cereale L.) including 39 expressed sequence tags. Theor. Appl. Genet. 109 (2004) 725-732.
• 13. Milczarski, P., Banek-Tabor, A., Lebiecka, K., Stojałowski, S., Myśków, B. and Masojć P., New genetic map of rye composed of PCR-based molecular markers and its alignment with the reference map of the DS2 × RXL10 intercross. J. Appl. Genet. 48 (2007) 11-24.
• 14. Börner, A., Korzun, V., Voylokov, A.V., Worland, A.J. and Weber, W.E. Genetic mapping of quantitative trait loci in rye (Secale cereale L.). Euphytica 116 (2000) 203-209.
• 15. Miedaner, T., Glass, C., Dreyer, F., Wilde, P., Wortmann, H. and Geiger H. H. Mapping of genes for male-fertility restoration in `Pampa` CMS winter rye (Secale cereale L.). Theor. Appl. Genet. 101 (2000) 1226-1233.
• 16. Miftahudin, Scoles, G.J. and Gustafson, J.P. AFLP markers tightly linked to the aluminium-tolerance gene Alt3 in rye (Secale cereale L.) Theor. Appl. Genet. 104 (2002) 626-631.
• 17. Milczarski, P. and Masojć, P. Interval mapping of genes controlling growth of rye plants. Plant Breed. Seed Sci. 48 (2003) 135-142.
• 18. Masojć, P. and Milczarski P. Mapping QTLs for alpha-amylase activity in rye grain. J. Appl. Genet. 46 (2005) 115-123.
• 19. Masojć, P., Banek-Tabor, A., Milczarski, P. and Twardowska, M. QTLs for resistance to preharvest sprouting in rye (Secale cereale L.) J. Appl. Genet. 48 (2007) 211-217.
• 20. Somers, D.J., Isaac, P. and Edwards K. A high-density microsatellite consensus map for bread wheat (Triticum aestivum L.) Theor. Appl. Genet. 109 (2004) 1105-1114.
• 21. Wenzl, P., Li, H., Carling, J., Zhou, M., Raman, H., Paul, E., Hearnden, P., Maier, Ch., Xia, L., Caig, V., Ovesna, J., Cakir, M., Poulsen, D., Wang, J., Raman, R., Smith, K.P., Muehlbauer, G.J., Chalmers, K.J., Kleinhofs, A., Huttner. E. and Kilian, A. A high density consensus map of barley linking DarT markers to SSR, RFLP and STS loci and agricultural traits. BMC Genomics 7 (2006) 206.
• 22. Hearnden, P.R., Eckermann, P.J., McMichael, G.L., Hayden, M.J., Eglinton, J.K. and Chalmers K.J. A genetic map of 1,000 SSR and DArT markers in a wide barley cross. Theor. Appl. Genet. 115 (2007) 383-391.
• 23. Myśków, B., Masojć, P., Banek-Tabor, A. and Szołkowski A. Genetic diversity of inbred rye lines evaluated by RAPD analysis. J. Appl. Genet. 42 (2001) 1-14.
• 24. Masojć, P., Myśków, B. and Milczarski P. Extending a RFLP-based genetic map of rye using random amplified polymorphic DNA (RAPD) and isozyme markers. Theor. Appl. Genet. 102 (2001) 1273-1279.
• 25. Bednarek, P.T., Masojć, P., Lewandowska, R. and Myśków, B. Saturating rye genetic map with amplified fragment length polymorphism (AFLP) and random amplified polymorphic DNA (RAPD) markers. J. Appl. Genet. 44 (2003) 21-33.
• 26. Stojałowski, S., Milczarski, P. and Masojć, P. Usefulness of ISSR markers for identification of inbred lines and mapping of rye genome. Biul. Inst. Hod. Aklim. Rośl. 231 (2004) 237-246.
• 27. Stojałowski, S., Jaciubek, M., Masojć, P. Rye SCAR markers for male fertility restoration in the P cytoplasm are also applicable to marker-assisted selection in the C cytoplasm. J. Appl. Genet. 46 (2005) 371-373.
• 28. Van Ooijen, J.W., Voorrips, R.E., JoinMap® v. 3.0, Software for the calculation of genetic linkage maps. Plant Research International B.V. Wageningen, the Netherlands, 2001.
• 29. Doligez, A., Adam-Blondon, A.F., Cipriani, G., Di Gaspero, G., Laucou, V., Merdinoglu, D., Meredith, C.P., Riaz, S., Roux, C. and This, P. An itegrated SSR map of grapevine based on five mapping populations Theor. Appl. Genet. 113 (2006) 369-382.