Nowa wersja platformy, zawierająca wyłącznie zasoby pełnotekstowe, jest już dostępna.
Przejdź na https://bibliotekanauki.pl

PL EN


Preferencje help
Widoczny [Schowaj] Abstrakt
Liczba wyników
2019 | 41 | 07 |
Tytuł artykułu

Effects of somatic embryogenesis on gene expression of cloned coffee heterozygous hybrids

Warianty tytułu
Języki publikacji
EN
Abstrakty
EN
Cloning of superior coffee plants by somatic embryogenesis can assist breeding programs on reducing the cost and time for launch of new cultivars. This study aimed to evaluate the efficiency of this methodology for cloning coffee trees with high heterozygosity, and to gather evidence that clonal progenies are faithful copies of mother plants. Selected plants IAC1 and IAC 2 from Coffea arabica breeding populations, resistant to leaf rust and leaf miner, respectively, were cloned via indirect somatic embryogenesis. Expression of selected genes involved in biological processes potentially affected by in vitro cultivation was evaluated by quantitative analysis. Genes encoding proteins associated with maintenance of DNA integrity and control of cell cycle presented predictable expression patterns along the clonal multiplication process. There were differences in the expression pattern of genes linked to in vitro cultivation-related stress, which were observed comparing either IAC 1 and IAC2 genotypes or clones and their corresponding mother plant. Those analyses suggest that the somatic embryogenesis does not lead to major genomic instability and clones are identical copies of mother plants, even with detected differences in the expression of genes that influence the response of in vitro cultivation.
Słowa kluczowe
Wydawca
-
Rocznik
Tom
41
Numer
07
Opis fizyczny
Article 118 [11p.], fig.,ref.
Twórcy
  • Coffee Center Agronomic Institute, Campinas, Brazil
  • Coffee Center Agronomic Institute, Campinas, Brazil
  • Coffee Center Agronomic Institute, Campinas, Brazil
  • Coffee Center Agronomic Institute, Campinas, Brazil
  • Coffee Center Agronomic Institute, Campinas, Brazil
autor
  • EMBRAPA and Coffee Center Agronomic Institute, Campinas, Brazil
  • Coffee Center Agronomic Institute, Campinas, Brazil
  • Coffee Center Agronomic Institute, Campinas, Brazil
Bibliografia
  • Alkimin ER, Caixeta ET, Sousa TV, Silva FL, Sakiyama NS, Zambolim L (2018) High-throughput targeted genotyping using next-generation sequencing applied in Coffea canephora breeding. Euphytica 214:50
  • Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215(3):403–410
  • Arroyo-Herrera A, Ku Gonzalez A, Canche Moo R, Quiroz-Figueroa FR, Loyola-Vargas VM, Rodriguez-Zapata LC, Rodriguez-Zapata C, Burgueff D′Hondt VM, Suárez-Solis EC (2008) Expression of WUSCHEL in Coffea canephora causes ectopic morphogenesis and increases somatic embryogenesis. Plant Cell Tissue Organ Cult 94:171–180. https://doi.org/10.1007/s11240-008-9401-1
  • Bender J (2004) DNA methylation and epigenetics. Annu Rev Plant Biol 55:41–68
  • Bertrand B, Alpizar E, Lara L, Santa-Creo R, Hidalgo M, Quijano JM, Montagnon C, Georget F, Etienne H (2011) Performance of Coffea arabica F1 hybrids in agroforestry and full-sun cropping systems in comparison with American pure lines cultivars. Euphytica 181:147–158
  • Bowler C, Benvenuto G, Laflamme P, Molino D, Probst AV, Tariq M, Paskowski J (2004) Chromatin techniques for plant cells. Plant J 39:776–789
  • Cang-Hsıen YAN, Cen LJ, Sung ZR (1995) Genetic regulation of shoot development in Arabidopsis: role of the EMF genes. Dev Biol 169:421–435
  • Devoto A, Turner JG (2003) Regulation of jasmonate-mediated plant responses in Arabidopsis. Ann Bot 92:329–337
  • Donato VMTS, Andrade AG, Cabral JB, Alves GD (2000) Embriogênese somática in vitro em couve-comum. Pesqui Agropecu Bras 35(4):711–718
  • Dussert S, Serret J, Bastos-Siqueira A, Morcillo F, Déchamp E, Rofidal V, Lashermes P, Etienne H, Joët T (2018) Integrative analysis of the late maturation programme and desiccation tolerance mechanisms in intermediate coffee seeds. J Exp Bot 69(7):1583–1597
  • Ferrão LFV, Ferrão RG, Ferrão MAG, Francisco A, Garcia AAF (2017) A mixed model to multiple harvest-location trials applied to genomic prediction in Coffea canephora. Tree Genet Genomes 13:95
  • Fuchs J, Demidov D, Houbem A, Schubert I (2006) Chromosomal histone modification patterns—from conservation to divertsity. TRENDS Plants Sci 11:199–208
  • Gaj MD (2004) Factors influencing SOMATIC embryogenesis induction and plant regeneration with particular reference to Arabidopsis thaliana (L.) Heynh. Plant Growth Regul 43:27–47
  • Guerreiro-Filho O (2006) Coffee leaf miner resistance. Braz J Plant Physiol 18:109–117
  • Guerreiro-Filho O, Silvarolla MB, Eskes AB (1999) Expression and mode of inheritance of resistance in coffee to leaf miner Perileucoptera coffeella. Euphytica 105(1):7–15
  • Landey BR, Cenci A, Georget F, Bertrand B, Camayo G, Dechamp E, Herrera JC, Santoni S, Lashermes P, Simpson J, Etienne H (2013) High genetic and epigenetic stability in Coffea arabica plants derived from embryogenic suspensions and secondary embryogenesis as revealed by AFLP, MSAP and the phenotypic variation rate. PLoS One 8(2):e56372
  • Maluf MP, Silva CCD, Oliveira MDPAD, Tavares AG, Silvarolla MB, Guerreiro Filho O (2009) Altered expression of the caffeine synthase gene in a naturally caffeine-free mutant of Coffea arabica. Genet Mol Biol 32(4):802–810
  • Menéndez-Yuffá A, Barry-Etienne D, Bertrand B, Georget F, Etienne H (2010) A comparative analysis of the development and quality of nursery plants derived from somatic embryogenesis and from seedlings for large-scale propagation of coffee (Coffea arabica L.). Plant Cell Tissue Organ Culture 102:297–307
  • Nic-Can GI, Lopez-Torres A, Barredo-Pool F, Wrobel K, Loyola-Vargas VM, Rojas-Herrera R, De-la-Pena C (2013) New insights into somatic embryogenesis: lEAFY COTYLEDON1, BABY BOOM1 and WUSCHEL RELATED HOMEOBOX4 are epigenetically regulated in Coffea canephora. PLoS One 8(8):e72160. https://doi.org/10.1371/journal.pone.0072160
  • Pereira AR et al (2007) Embriogênese somática direta em explantes foliares de Coffea arabica L. cv. Acaiá cerrado: efeito de cinetina e ácido giberélico. Ciência e Agrotecnologia Lavras 31(2):332–336
  • Phillips RL, Kaeppler SM, Olhoft P (1994) Genetic instability of plant tissue cultures: breakdown of normal controls. Proc Natl Acad Sci 91:5222–5226
  • SBW do Brasil—Rodovia SP (2018) 107—Km 32—Holambra/SP/BRASIL—CEP 13.825-000 Copyright© 2018 SBW do BRASIL. http://www.sbwbrasil.com.br/
  • Shahzad A, Sharma S, Parveen S, Saeed T, Shaheen A, Akhtar R, Ahmad Z (2017) Historical perspective and basic principles of plant tissue culture. In: Abdin MZ, Kiran U, Kamaluddin M, Ali A (eds) Plant biotechnology: principles and applications. Springer, Singapore, pp 1–36
  • Silva AT, Barduche D, do Livramento KG, Ligterink W, Paiva LV (2014) Characterization of a putative serk-like ortholog in embryogenic cell suspension cultures of Coffea arabica L. Plant Mol Biol Rep 32:176–184. https://doi.org/10.1007/s11105-013-0632-x
  • Taiz L, Zeiger E (2009) Fisiologia Vegetal. Ed. 4. Artmed, Porto Alegre, p 819
  • Talapatra S, Ghoshal N, Raychaudhuri SS (2014) Molecular characterization, modeling and expression analysis of a somatic embryogenesis receptor kinase (SERK) gene in Momordica charantia L. during somatic embryogenesis. Plant Cell Tissue Organ Cult 116(3):271–283
  • Vieira LGE et al (2006) Brazilian coffee genome Project: eST-based genomic resource. Braz J Plant Physiol 18:95–108
Typ dokumentu
Bibliografia
Identyfikatory
Identyfikator YADDA
bwmeta1.element.agro-60266c82-6d39-4a5f-aa55-248c191c5b4f
JavaScript jest wyłączony w Twojej przeglądarce internetowej. Włącz go, a następnie odśwież stronę, aby móc w pełni z niej korzystać.