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Distribution of position of segment initiating the chain-like structure translocation through the membrane opening

Bartłomiejczyk K.

Journal of Applied Mathematics and Computational Mechanics

2013

Vol. 12, nr 1

5--10

This article discusses the transport of chain-like structures across a pore in membrane. Such a translocation process is initiated by the first monomer captured by molecules forming the pore. This study focuses on the distribution of the position of this particular polymer’s segment. The polymer attachment process is simulated using the sequential algorithm and the influence of various physical and chemical parameters is analyzed. Selected results are presented by means of different histograms.

A sequential algorithm for modelling random movements of chain-like structures

Grzybowski A., Domański Z.

Prace Naukowe Instytutu Matematyki i Informatyki Politechniki Częstochowskiej

2011

Vol. 10, nr 1

5-10

We introduce a sequential cellular-automata-like algorithm enabling efficient sampling of vast search spaces related to the kinetics of long polymers. As an example, with the help of our algorithm we study the movements of linear polymers in the vicinity of a flat membrane with holes in it.