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Diversity and succession of microbial communities on typical microplastics in Xincun Bay, a long-term mariculture tropical lagoon

Shi Yunfeng, Wang Shuai, Wang Hui, Li Zhaoyang, Cai Jiali, Han Qiuying, Zhao Muqiu

Oceanological and Hydrobiological Studies

2022

Vol. 51, No. 1

10--22

In this study, three polymer types of microplastics (MPs), polyethylene (PE), polystyrene (PS) and polypropylene (PP), were exposed for 60 days in Xincun Bay (Hainan, China), a long-term mariculture tropical lagoon. High-throughput sequencing and scanning electron microscopy (SEM) were used to investigate the succession of microbial community structure and function on MPs after 10, 30, and 60 days of exposure, respectively. The results showed that diversity indices for bacteria from MPs were higher than those for bacteria from seawater. Significant differences were observed in community structure and metabolic function between MPs and seawater. The microbial network structure on MPs was more complex and dispersed than that in seawater. No significant differences in bacterial community structure and metabolic function were observed among different types of MPs.The biofilm on PS was the thickest, and the network structure on PP was the most complex one. With increasing exposure time, the biofilm attached to the surface of MPs became thicker and microbial composition showed some differences.The analysis of potential degradation bacteria and pathogens with abundance above 0.01% showed that the abundance of several potential plastic biodegraders on MPs was higher than that in seawater, while no potential pathogen was found enriched on MPs.

Metagenomic Analysis Reveals Microbial Communities in Lake Qarun – Egypt

Yosef Mahmoud Mohamed, Elrefy Ali Mohamed, Elfeky Fawzy Ali

Journal of Ecological Engineering

2022

Vol. 23, nr 2

70--76

Characterization of water quality in Lake Qarun indicated that the water is very poor for irrigation and aquatic life. At the same time, the bacterial community was represented mainly by five bacterial phyla with different proportions: Firmicutes (53%), Proteobacteria (33%), Bacteroidetes (7%), Actinobacteria (5%) and Thermi (1%). Furthermore, metagenomes prediction of bacterial communities using PICRUSt indicated important functional gene families associated with metabolism, environmental information, genetic information processing, and cellular processes. It is worth noting that Benzoate degradation had the highest average relative abundance, followed by aminobenzoate degradation among 18 individual KEGG pathways from xenobiotics biodegradation and metabolism which showed higher relative abundance. The obtained data indicate that a different source of pollution in Qarun Lakes has an impact on the bacterial community’s structure, as well as the biota and is expected to cause health problems.

Bacterial Community of Neutral Mine Drainage of Elizabeth’s Shaft (Slovinky, Slovakia)

Kiskova Jana, Perhacova Zuzana, Vlcko Ladislav, Sedlakova-Kadukova Jana, Kvasnova Simona, Pristas Peter

Inżynieria Mineralna

2019

R. 21, nr 1

89--94

Neutral mine drainage is the less frequent subject of the interest than acid mine drainage but it can have adverse environmental effects caused mainly by precipitation of dissolved Fe. The aim of the study was to characterize the composition of bacterial population in environment with high concentration of iron and sulfur compounds represented by neutral mine drainage water of Elizabeth’s shaft, Slovinky (Slovakia). The pH value of drainage water decreased from 7.1 to 6.5 during the years 2008–2014. Direct microscopic observations, cultivation methods, and 454 pyrosequencing of the 16S rRNA gene amplicons were used to examine the bacterial population. Microscopic observations identified iron–oxidizing Proteobacteria of the genera Gallionella and Leptothrix which occurrence was not changed during the years 2008–2014. Using 454 pyrosequencing, there were identified members of 204 bacterial genera that belonged to 25 phyla. Proteobacteria (69.55%), followed by Chloroflexi (10.31%) and Actinobacteria (4.24%) dominated the bacterial community. Genera Azotobacter (24.52%) and Pseudomonas (14.15%), followed by iron–oxidizing Proteobacteria Dechloromonas (11%) and Methyloversatilis (8.53%) were most abundant within bacterial community. Typical sulfur bacteria were detected with lower frequency, e.g., Desulfobacteraceae (0.25%), Desulfovibrionaceae (0.16%), or Desulfobulbaceae (0.11%). Our data indicate that the composition of bacterial community of the Elizabeth’s shaft drainage water reflects observed neutral pH, high level of iron and sulfur ions in this aquatic habitat.

Odciek kopalniany o odczynie obojętnym jest rzadszym przedmiotem zainteresowania niż odciek kopalniany kwaśny, ale może mieć niekorzystne skutki środowiskowe spowodowane głównie przez wytrącanie rozpuszczonego Fe. Celem artykułu jest scharakteryzowanie składu bakterii w środowisku o wysokim stężeniu związków żelaza i siarki reprezentowanych przez obojętne wody drenażowe kopalni szybu Elizabeth, Slovinky (Słowacja). Wartość pH wody drenażowej spadła z 7,1 do 6,5 w latach 2008–2014. Bezpośrednie obserwacje mikroskopowe, metody hodowli i pirosekwencjonowanie amplikonów genu 16S rRNA wykorzystano do zbadania populacji bakterii. Obserwacje mikroskopowe zidentyfikowały proteobakterie utleniające żelazo z rodzajów Gallionella i Leptothrix, których występowanie nie uległo zmianie w latach 2008–2014. Przy użyciu pirosekwencjonowania 454 zidentyfikowano 204 rodzajów bakterii należących do 25 typów. Proteobakterie (69,55%), a następnie Chloroflexi (10,31%) i aktynobakte rie (4,24%) zdominowały społeczność bakteryjną. Rodzaje Azotobacter (24,52%) i Pseudomonas (14,15%), a następnie proeto-bakterie żelazo utleniające Dechloromonas (11%) i Methyloversatilis (8,53%) były najbardziej rozpowszechnione w społeczności bakteryjnej. Typowe bakterie siarkowe wykryto z mniejszą częstotliwością, np. Desulfobacteraceae (0,25%), Desulfovibrionaceae (0,16%) lub Desulfobulbaceae (0,11%). Uzyskane dane wskazują, że skład flory bakteryjnej wody drenażowej szybu Elżbieta odzwierciedla obserwowane neutralne pH, wysoki poziom zawartości jonów żelaza i siarki w środowisku wodnym.