Wyniki wyszukiwania - BazTech

Ograniczanie wyników

1 Bulletin of the Polish Academy of Sciences. Technical Sciences

1 2012

Znaleziono wyników: 1

Liczba wyników na stronie

Wyniki wyszukiwania

Wyszukiwano:
w słowach kluczowych: alignment with backtracking procedure

Sortuj według:

Ogranicz wyniki do:

G-PAS 2.0 - an improved version of protein alignment tool with an efficient backtracking routine on multiple GPUs

Frohmberg W., Kierzynka M., Blazewicz J., Wojciechowski P.

Bulletin of the Polish Academy of Sciences. Technical Sciences

2012

Vol. 60, nr 3

491-494

Several highly efficient alignment tools have been released over the past few years, including those taking advantage of GPUs (Graphics Processing Units). G-PAS (GPU-based Pairwise Alignment Software) was one of them, however, with a couple of interesting features that made it unique. Nevertheless, in order to adapt it to a new computational architecture some changes had to be introduced. In this paper we present G-PAS 2.0 - a new version of the software for performing high-throughput alignment. Results show, that the new version is faster nearly by a fourth on the same hardware, reaching over 20 GCUPS (Giga Cell Updates Per Second).