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Sondy fluorescencyjne typu „light up” do detekcji i obrazowania G-kwadrupleksów in vitro i in vivo. Cz. 1 i 2

Baranowski Daniel

Wiadomości Chemiczne

2020

[Z] 74, 11-12

883--901

G-quadruplexes are non-canonical guanosine rich four stranded nucleic acids structures consisting of at least two or more G-tetrads stabilized by an array of Hoogsteen hydrogend bonds and monovalent cations. The distinguishing feature of the G-quadruplexes is their high thermal stability and structural polymorphism in aqueous media. In parallel, a great number of GQ structures have been extensively surveyed ex vivo by means of biophysical techniques such as nuclear magnetic resonance (NMR) spectroscopy, circular dichroism (CD) spectroscopy, and X-ray crystallography. Accumulating evidence suggesting that G-quadruplexes play essential role in a numerous biological processes in vivo, including DNA replication and transcription, RNA translation as well as genomic maintenance. Consequently, G-quadruplexes has attracted attention as therapeutic targets in cancer or hereditary diseases as well as molecular target in cellular biology. Study on G-quadruplexes:ligand interaction by NMR, CD, UV and fluorescence spectroscopy in vitro or in vivo has become an intensive research work area of many groups in recent years. Nowadays, there are available large amount of organic compounds that selectively bind to G-quadruplexes and their photophysical and kinetic properties were comprehensively characterized but only few of them are endowed with fluorescence properties that could be applicable as fluorescent probes in cellular biology or in vitro detection. Interestingly, the group of these fluorescent probes is characterized by a vast structural diverisity resulting from the different way of interaction with G-quadruplexes as well as G-quadruplex polymorphism. This review focuses on the G-quadruplex-selective light up fluorescent probes that have been employed for in vitro detection as well as cellular imaging along with a summary of the key photophysical, biophysical, and biological properties of reported examples.

A near-infrared fluorescent probe for selective detection of fluorion

Kang Yan-Fei, Wei Fan, Meng Ya-Li, Xin Zhen-Hui, Wei Dong

Polish Journal of Chemical Technology

2020

Vol. 22, nr 1

1--5

In this work, we have designed and synthesized the fluorescent probe 1, which was capable to selectively detect fluoride anion (F−). More importantly, the probe 1 possessed near-infrared excitation and emission wavelengths (excitation at 650 nm and emission at 695), and the probe solution had changed dramatically from yellow to cyan with the addition of F–. In addition, the fluorescence intensity exhibited perfectly positive correlation with concentration of F− concentration from 0 to 40 μM (R2 = 0.9972), which offered the important condition for quantitative analysis. The probe 1 owned detection limit of 46 nM. Therefore, this near-infrared probe can be of great benefit for detecting F− in practical application.

A coumarin-based fluorescent probe for specific and rapid detection of fluoride ions

Xin Z.-H., Meng Y.-L., Wu Y.-H., Feng Z.-K., Kang Y.-F.

Polish Journal of Chemical Technology

2018

Vol. 20, nr 4

1--5

A simple and coumarin-based fluorescence probe has been designed and synthesized with silyl group as recognition group of fluoride ions (F−) in this study. The results showed that the fluorescence intensity of the probe displayed prominent enhancement with addition of F− at 445 nm with incubation of 1 min. There was an excellent linear relationship between fluorescence intensity and fluoride concentration from 0 to 30 μM (0~0.57 ppm), which offered the important condition for the quantitative analysis. In addition, the highly selective response to fluorion, the low detection limit with 28 nM (0.532 ppb), low toxicity and bioimaging afforded an advantage for practical application and detecting fluoride in biological systerms.