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1 Journal of Medical Informatics & Technologies

1 2018

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Database structure for storing and automatic analysis of text GTG and fish cytogenetic results

Kostorz I., Sikora M., Stęclik T.

Journal of Medical Informatics & Technologies

2018

Vol. 27

41--48

The paper presents research on storing text cytogenetic tests data conducted with GTG and FISH methods for browsing and automatic processing of its string results. It presents analysis of the text cytogenetic test result and a two proposal structures of the databases (the storing data and the analytical one) used for anonymised text GTG and FISH cytogenetic test results storing and their processing. Presented structures were queried with known chromosome aberrations for T-cell acute lymphoblastic leukaemia (T-ALL), B-cell acute lymphoblastic leukaemia (B-ALL) and both T-ALL and B-ALL in the proposed database. Additionally, the analytical database was filled with the set of Mittelman database results and browsed with non-standard queries. Conducted tests demonstrated that the proposed analitical structure is useful for GTG and FISH cytogenetic test results text mining.