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The Application of PCR Reaction for Identification of MHB Bacteria Species

Ząbkiewicz A., Myga-Nowak M., Bandurska K., Paczyńska J., Szybecka A., Krupa P.

Archives of Environmental Protection

2014

Vol. 40, no. 2

115--122

This study characterizes mycorrhiza helper bacteria (MHB) from selected unpolluted locations as well as subjected to industrial emissions. To determine the species of bacteria isolated from the roots of ectomycorrhizal pine and birch, a method based on the sequence analysis of a 16S rRNA gene was used. The isolated bacteria were initially characterized by available biochemical methods and phenotypic observation. On the selected bacteria representatives isolation of DNA was performed, on which the PCR reaction was carried out. In this way amplified samples were automatically sequenced and the obtained results were compared to public databases. Among the isolated bacteria Pseudomonas fluorescens SBW25 and Burkholderia xenovorans LB400 species were dominant.

W pracy scharakteryzowano bakterie wspomagające mikoryzę pochodzące z wybranych terenów ekologicznie czystych oraz z terenów poddanych emisji przemysłowej. Przedstawiono wykorzystanie metody opartej na analizie sekwencji genu 16S rRNA do określenia przynależności gatunkowej bakterii wyizolowanych z korzeni ektomikoryzowych sosny i brzozy. Wyizolowane bakterie zostały wstępnie scharakteryzowane przy pomocy dostępnych metod biochemicznych i obserwacji fenotypowej. Dla wybranych przedstawicieli dokonano izolacji DNA, względem którego przeprowadzono reakcję PCR. Powielone w ten sposób próbki automatycznie zsekwencjonowano, a uzyskane sekwencje porównywano w ogólnodostępnych bazach danych. Wśród wyizolowanych bakterii dominowały gatunki Pseudomonas fluorescens SBW25 oraz Burkholderia xenovorans LB400.

Formation of active sites in thermally treated hydrotalcite-based catalysts for acetone aldolization

Kuśtrowski P., Sułkowska D., Chmielarz L., Paczyńska J., Dziembaj R.

Polish Journal of Chemical Technology

2005

Vol. 7, nr 1

33-37

Mg-AI hydrotalcite containing CO3(2-) and NO3(-) as interlayer anions was synthesized according to the coprecipitation method at constant pH (9.0) and temperature (50°C), and then transformed into mixed metal oxides by calcination at 450, 500, 550 or 600°C for 8 h. The as-prepared hydrotalcite-like sample was characterized with respect to its structure (XRD), chemical composition (XRF, elemental analysis) and thermal stability (EGA-MS). Moreover, the textural features of the thermally activated hydrotalcite were examined using low-temperature (77 K) sorption of N2. Changes in the acid-base properties of the precursor calcined at different temperatures were studied by means of temperature-programmed desorptions of NH3 and CO2. It was found that the hydrotalcite-like sample calcined at 450°C, containing a part of non-decomposed interlayer anions, showed a rather low concentration of acidic and basic surface sites. The increase in the calcination temperature caused the removal of the interlayer anions, and an increase in the concentration and strength of the acidic and basic surface centers. The formation of high number of acid/ base surface sites resulted in raising the catalytic activity of the calcined hydrotalcites in the liquid-phase aldol condensation of acetone.