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Trend and prediction of COVID-19 outbreak in Iran: SEIR and ANFIS model

Identyfikatory
Warianty tytułu
Języki publikacji
EN
Abstrakty
EN
Background: Mathematical and predictive modeling approaches can be used in COVID-19 crisis to forecast the trend of new cases for healthcare management purposes. Given the COVID-19 disease pandemic, the prediction of the epidemic trend of this disease is so important. Methods: We constructed an SEIR (Susceptible-Exposed-Infected-Recovered) model on the COVID-19 outbreak in Iran. We estimated model parameters by the data on notified cases in Iran in the time window 1/22/2020 – 20/7/2021. Global sensitivity analysis is performed to determine the correlation between epidemiological variables and SEIR model parameters and to assess SEIR model robustness against perturbation to parameters. We Combined Adaptive Neuro- Fuzzy Inference System (ANFIS) as a rigorous time series prediction approach with the SEIR model to predict the trend of COVID-19 new cases under two different scenarios including social distance and non-social distance. Results: The SEIR and ANFIS model predicted new cases of COVID-19 for the period February 7, 2021, till August 7, 2021. Model predictions in the non-social distancing scenario indicate that the corona epidemic in Iran may recur as an immortal oscillation and Iran may undergo a recurrence of the third peak. Conclusion: Combining parametrized SEIR model and ANFIS is effective in predicting the trend of COVID-19 new cases in Iran.
Rocznik
Strony
241--249
Opis fizyczny
Bibliogr. 26 poz., rys., tab.
Twórcy
  • Departments of Biomedical Engineering, School of Medicine, Tehran University of Medical Sciences, Tehran, Iran
  • Research Center for Biomedical Technologies and Robotics, Tehran, Iran
  • Students’ Scientific Research Center, Tehran University of Medical Sciences, Tehran, Iran
  • Department of Health Economics, School of Health Management and Information Sciences, Iran University of Medical Sciences, Tehran, Iran
autor
  • Department of Healthcare Management, School of Health, Qazvin University of Medical Sciences, Qazvin, Iran
  • Departments of Biomedical Engineering, School of Medicine, Isfahan University of Medical Sciences, Isfahan, Iran
  • Departments of Biomedical Engineering, School of Medicine, Tehran University of Medical Sciences, Tehran, Iran
  • Research Center for Biomedical Technologies and Robotics, Tehran, Iran
  • Cellular and Molecular Research Center, Research Institute for Prevention of Non-Communicable Diseases, Qazvin University of Medical Sciences, Qazvin, Iran
Bibliografia
  • 1. Chen L, Liu W, Zhang Q, et al. RNA based mNGS approach identifies a novel human coronavirus from two individual pneumonia cases in 2019 Wuhan outbreak. Emerg Microbes Infect. 2020;9(1):313-319. https://doi.org/10.1080/22221751.2020.1725399
  • 2. Wangping J, Ke H, Yang S, et al. Extended SIR prediction of the epidemics trend of COVID-19 in Italy and compared with Hunan, China. Front Med. 2020;7:169. https://doi.org/10.3389/fmed.2020.00169
  • 3. Hamzah FAB, Lau C, Nazri H, Ligot D V, Lee G, Tan CL. CoronaTracker: worldwide COVID-19 outbreak data analysis and prediction. Bull World Heal Organ. 2020;1:32. https://doi.org/10.2471/BLT.20.255695
  • 4. Roser M, Ritchie H, Ortiz-Ospina E, Hasell J. Coronavirus disease (COVID-19)–Statistics and research. Our World data. Published online 2020. https://ourworldindata.org/coronavirus
  • 5. Chen N, Zhou M, Dong X, et al. Epidemiological and clinical characteristics of 99 cases of 2019 novel coronavirus pneumonia in Wuhan, China: a descriptive study. Lancet. 2020;395(10223):507-513. https://doi.org/10.1016/S0140-6736(20)30211-7
  • 6. Huang C, Wang Y, Li X, et al. Clinical features of patients infected with 2019 novel coronavirus in Wuhan, China. Lancet. 2020;395(10223):497-506. https://doi.org/10.1016/S0140-6736(20)30183-5
  • 7. Bao L, Deng W, Huang B, et al. The pathogenicity of SARS-CoV-2 in hACE2 transgenic mice. Nature. 2020;583:830-833. https://doi.org/10.1038/s41586-020-2312-y
  • 8. Niazkar M, Niazkar HR. COVID-19 Outbreak: Application of Multi-gene Genetic Programming to Country-based Prediction Models. Electron J Gen Med. 2020;17(5). https://doi.org/10.29333/ejgm/8232
  • 9. Wang P, Zheng X, Li J, Zhu B. Prediction of epidemic trends in COVID-19 with logistic model and machine learning technics. Chaos, Solitons & Fractals. 2020;139:110058. https://doi.org/10.1016/j.chaos.2020.110058
  • 10. Abdi M, Mirzaei R. Iran Without Mandatory Quarantine and with Social Distancing Strategy Against Coronavirus Disease (COVID-19). Heal Secur. 2020;18(3). https://doi.org/10.1089/hs.2020.0041
  • 11. Picchiotti N, Salvioli M, Zanardini E, Missale F. COVID-19 Italian and Europe epidemic evolution: A SEIR model with lockdowndependent transmission rate based on Chinese data. 2020. https://doi.org/10.2139/ssrn.3562452
  • 12. Al-Qaness MAA, Fan H, Ewees AA, Yousri D, Abd Elaziz M. Improved ANFIS model for forecasting Wuhan City Air Quality and analysis COVID-19 lockdown impacts on air quality. Environ Res. 2021;194:110607. https://doi.org/10.1016/j.envres.2020.110607
  • 13. Behnood A, Golafshani EM, Hosseini SM. Determinants of the infection rate of the COVID-19 in the US using ANFIS and virus optimization algorithm (VOA). Chaos, Solitons & Fractals. 2020;139:110051. https://doi.org/10.1016/j.chaos.2020.110051
  • 14. Saif S, Das P, Biswas S. A Hybrid Model based on mBA-ANFIS for COVID-19 Confirmed Cases Prediction and Forecast. J Inst Eng Ser B. 2021:1-14. https://doi.org/10.1007/s40031-021-00538-0
  • 15. Hu, S.Akaike Information Criterion; Center for Research in Scientific Computation, North Carolina State University: Raleigh, NC,USA, 2007.
  • 16. Marino S, Hogue IB, Ray CJ, Kirschner DE. A methodology for performing global uncertainty and sensitivity analysis in systems biology. J Theor Biol. 2008;254(1):178-196. https://doi.org/10.1016/j.jtbi.2008.04.011
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  • 18. Sardar T, Nadim SS, Rana S, Chattopadhyay J. Assessment of Lockdown Effect in Some States and Overall India: A Predictive Mathematical Study on COVID-19 Outbreak. Chaos, Solitons & Fractals. 2020;139:110078. https://doi.org/10.1016/j.chaos.2020.110078
  • 19. Zhang J, Litvinova M, Wang W, et al. Evolving epidemiology and transmission dynamics of coronavirus disease 2019 outside Hubei province, China: a descriptive and modelling study. Lancet Infect Dis.2020;20(7):793-802. https://doi.org/10.1016/S1473-3099(20)30230-9
  • 20. Hsih W-H, Cheng M-Y, Ho M-W, et al. Featuring COVID-19 cases via screening symptomatic patients with epidemiologic link during flu season in a medical center of central Taiwan. J Microbiol Immunol Infect. 2020;53(3):459-466. https://doi.org/10.1016/j.jmii.2020.03.008
  • 21. Abdulmajeed K, Adeleke M, Popoola L. Online forecasting of COVID-19 cases in Nigeria using limited data. Data Br. 2020;30:105683. https://doi.org/10.1016/j.dib.2020.105683
  • 22. Zareie B, Roshani A, Mansournia MA, Rasouli MA, Moradi G. A model for COVID-19 prediction in Iran based on China parameters. medRxiv. 2020. https://doi.org/10.1101/2020.03.19.20038950
  • 23. Sun J, Chen X, Zhang Z, et al. Forecasting the long-term trend of COVID-19 epidemic using a dynamic model. Sci Rep. 2020;10(1):1-10. https://doi.org/10.1038/s41598-020-78084-w
  • 24. Fanelli D, Piazza F. Analysis and forecast of COVID-19 spreading in China, Italy and France. Chaos, Solitons & Fractals. 2020;134:109761. https://doi.org/10.1016/j.chaos.2020.109761
  • 25. Syed F, Sibgatullah S. Estimation of the Final Size of the COVID-19 Epidemic in Pakistan. medRxiv. 2020. https://doi.org/10.1101/2020.04.01.20050369
  • 26. Sukumaran R, Patwa P, Sethuraman T V, et al. COVID-19 Outbreak Prediction and Analysis using Self Reported Symptoms. arXiv Prepr. arXiv:210110266. 2020.
Typ dokumentu
Bibliografia
Identyfikator YADDA
bwmeta1.element.baztech-fdace956-a3c0-4a98-82e3-68bb8e233d88
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