Powiadomienia systemowe
- Sesja wygasła!
- Sesja wygasła!
- Sesja wygasła!
Tytuł artykułu
Wybrane pełne teksty z tego czasopisma
Identyfikatory
Warianty tytułu
Języki publikacji
Abstrakty
Genetic variability and differentiation of six populations of Tilia rubra from Hyrcanian forests of the north of Iran were analyzed using random amplified polymorphic DNA (RAPD) markers. Seven primers pairs used to study six populations, in six localities located in at different altitude (250–2500 m a.s.l) but within the distance 50 km, provided 70 reliable bands, of which 29 (41.4%) were polymorphic. The average population diversity using the Shannon’s index (I) was 0.22 and ranged from 0.22 for Bandbon population to 0.08 for the Salahedinkola population. The mean heterozygosity varied from 0.013 to 0.06 within the populations of T. rubra. The AMOVA analysis showed a significant genetic differentiation within populations and 97% of the total variation occurred within populations and only 3% occurred among populations. Cluster analysis using the UPGMA method grouped all individuals into four clusters. The results did not correspond with the populations origin. The low inter-population differentiation and the lack of significant correlation between geographic and genetic distances suggest intensive gene flow among populations of Tilia rubra.
Czasopismo
Rocznik
Tom
Strony
341--348
Opis fizyczny
Bibliogr. 42 poz., il.
Twórcy
autor
- Department of Biology, Nano and Biotechnology Research Group, Faculty of Basic Sciences, University of Mazandaran, Babolsar, 47416–95447, Iran
autor
- Department of Biology, Payam-e Noor University of Esfahan, Esfahan, Iran
autor
- Department of Biology, Nano and Biotechnology Research Group, Faculty of Basic Sciences, University of Mazandaran, Babolsar, 47416–95447, Iran
autor
- Forestry Department, Faculty of Natural Resources, Tarbiat Modares University, Iran
Bibliografia
- 1. Anderson J.A., Churchill G.A., Autrique J.E., Tanksley S.D., Sorrells, M.E. 1992 - Optimizing parental selection for genetic linkage maps - Genome, 36: 181-186.
- 2. Azfer A., Bashamboo A., Ahmed N., AH, S. 1999 - Random amplification of polymorphic DNA with conserved sequences reveals genome specific monomorphic amplicons: implications in clad identification - J. Biol. Sci. 24: 101-7.
- 3. Balloux F., Lehmann L. Demeeus T. 2003 - The population genetics of clonal and partially clonal diploids - Genetics, 164: 1635-1644.
- 4. Belletti P., Monteleone I., Ferrazzini. D. 2008 - A population genetic study in a scattered forest species, wildservice tree [Sorbus torminalis (L.) Crantz], using RAPD markers - Eur. J. Forest Res. 127: 103-114.
- 5. Cardoso M.A., Provan W., Powell J., Ferreras P.C.G., Oliveira D.E. 1998 - High genetic differentiation among remnant populations of the endangered Caesalpinia echinata Lam. (Leguminosae - Caesalpinioideae) - Mol. Ecol. 7: 601- 608.
- 6. Chalmers K.J., Waugh R., Sprent J.I., Simons A.J., Powell W. 1992-Detection of genetic variation between and within populations of Gliricidia sepium and G. maculata using RAPD markers - Heredity, 69: 465-472.
- 7. De Greef B., Triest L., De Cuyper B., Van Slyeken J. 1998 - Assessment of intraspecific variation in half-sibs of Quercus petraea (Matt.) Liebl. ‘plus’ trees - Heredity, 91: 284-290.
- 8. Dellaporta S.L., Wood J., Hicks J.B. 1983 - A plant DNA minipreparation: version II - Plant Mol. Biol. Rep. 1: 19-21.
- 9. Doyle J.J., Doyle J.L. 1987 - A rapid DNA isolation procedure for small quantities of fresh leaf tissue - Phytochem. Bull. Evol. 19: 11-15.
- 10. Eisenhut G. 1957 - Bliihen, Fruchten und Kei-men in der Gattung Tilia - Ph.D. thesis, University of Miinchen.
- 11. Fineschi S., Carnevale S., Salvini D., Turchini D., Vendramin G.G. 2003 - Chloroplast DNA variation of Tilia cordata Mill - Can. J. Forest. Res. 33: 2503-2508.
- 12. Fritsch P., Rieseberg L.H. 1996 - The use of random amplified polymorphic DNA (RAPD) in conservation genetics (In: Molecular Genetic Approaches in Conservation, Eds: Smith T.B., Wayne R.K.) - Oxford Press University, New York, USA, pp. 54-73.
- 13. Fromm M., Hattemer H.H. 2003 - Inheritance of allozymes and hybridisation in two European Tilia species - Heredity, 91: 337-344.
- 14. Gaudeul, M., Stenøien, H.K., Agren, J. 2007 - Landscape structure, clonal propagation, and genetic diversity in Scandinavian populations of Arabidopsis lyrata (Brassicaceae) - Amer. J. Bot. 94: 1146-1155.
- 15. Gonzalez-Astorga J., Castillo-Campos G. 2004 - Genetic variability of the narrow endemic tree Antirhea aromatica Castillo-Campos & Lorence (Rubiaceae, Guettardeae) in a tropical forest of Mexico - Ann. Bot. 93: 521-528.
- 16. Halkett R, Simon J.C., Balloux. F. 2005 - Tackling the population genetics of clonal and partially clonal organisms - Trends. Ecol. Evol. 20: 194-201.
- 17. Hamrick J.L., Godt M.J.W. 1990 - Allozyme diversity in plant species (In: Plant Population Genetics, Breeding, and Genetic Resources, Eds: Brown A.D.H., Clegg M.T., Kahler A.L., Weir B.S.) - Sinauer Associates Inc., Sunderland, MA., pp. 43-63.
- 18. Hamrick J.L., Godt M.J.W., Murawshi D.A., Loveless M.D. 1991 - Correlations between species traits and allozyme diversity: implications for conservation biology (In: Genetics and Conservation of Rare Plants, Eds: Falk D.A., Holsinger K.E.) - Oxford University Press, New York, USA, pp. 75-86.
- 19. Hamrick J.L., Godt M.J.W., Sherman-Broyles S.L. 1992 - Factors influencing levels of genetic diversity in woody plant species - New Forest, 5:95-124.
- 20. Hosseinzadeh Colagar A., Saadati M., Zarea M., Ahmadi Talei S. 2010 - Genetic variation of the iranian Sderotinia sderotiorum isolates by standardizing DNA polymorphic fragments - Biotechnology, 9: 67-72.
- 21. Ito E., Kikuzawa K. 1999 - Cryptic andromonoecy in Tilia japonica implicated by flower abortion - Plant species Biol. 14:193-199.
- 22. Kim S.C., Lee C., Santos-Guerra A. 2005 - Genetic analysis and conservation of the endangered Canary Island woody sow-thistle, Sonchus gandogeri (Asteraceae) - J. Plant Res. 118: 147-153.
- 23. Leestmans R. 2005 - Le refuge caspiens et son importance en biogeography - Linneana Bel-gica,20:97-102.
- 24. Liesebach H., Sinkó Z. 2008 - A contribution to the systematics of the genus Tilia with respect to some hybrids by RAPD analysis - Dendrobiol. 59: 13-22.
- 25. Liu Z., Furnier G.R. 1993 - Comparison of allozyme, RFLP, and RAPD markers for revealing genetic variation within and between trembling aspen and bigtooth aspen - Theor. Appl. Genet. 87:97-105.
- 26. Maki M., Horie S. 1999 - Random amplified polymorphic DNA (RAPD) markers reveal less genetic variation in the endangered plant Cerastium fischerianum var. molle than in the widespread conspecific C. fischerianum var. fischerianum (Caryophyllaceae) - Mol. Ecol. 8:145-150.
- 27. Mantel N. 1967 - The detection of disease clustering and a generalized regression approach - Cancer Res. 27: 209-220.
- 28. Martin C., Gonzalez-Benito M.E., Iriondo J.M. 1997 - Genetic diversity within and among populations of a threatened species: Erodium paularense Fern. Gonz. & Izco - Mol. Ecol. 6:813-820.
- 29. Maurer W.D., Tabel U. 1995 - A methodical study to improve the allozyme analysis for identification of clones of Tilia - Silvae. Genet. 44: 351-356.
- 30. Nei M. 1973 - Analysis of gene diversity in subdivided populations - Proc. Natl. Acad. Sci. U.S.A. 70: 3321-3323.
- 31. Nybom H., Bartish I.V. 2000 - Effects of life history traits and sampling strategies on genetic diversity estimates obtained with RAPD markers in plants - Perspect. Plant Ecol. Evol. Syst. 3:93-114.
- 32. Paw U.K.T., Hotton C. 1989 - Optimum pollen and female receptor size for anemophily -Amer. J. Bot. 76:445-453
- 33. Peakall R., Smouse P.E. 2001 - GenAlEx: Genetic Analysis in Excel. Population genetic software for teaching and research. Australian National University, Canberra, http://www.anu.edu.au/BoZo/GenAlEx
- 34. Pvingila D., Verbylaitë R., Baliuckas V., Pliûra A., Kuusienë S. 2005 - Genetic diversity (RAPD) in natural Lithuanian populations of common ash (Fraxinus excelsior L.) - Biologia, 3: 46-53.
- 35. Sambrook J., Russell D.W. 2001-Molecular Cloning: A Laboratory Manual - 3rd ed. Cold Spring Harbor Laboratory Press, New York, pp. 8.13-8.16.
- 36. Slavov G.T., Difazio S.P., Strauss S.H. 2002 - Gene flow in forest trees: From empirical estimates to transgenic risk assessment (In: Ecological and Agronomic Consequences of Gene Flow from Transgenic Crops to Wild Relatives) - Ohio State University, Columbus, pp. 106-119; http://www.biosci.ohio-state.edu/~lspencer/Proceedings.pdf.
- 37. Szmidt A.E., Wang X.R., Lu M.Z. 1996 - Empirical assessment of allozyme and RAPD variation in Pinus sylvestris (L.) using haploid tissue analysis - Heredity, 76: 412-420.
- 38. Thomas B.R., McDonald S.E., Hicks M., Adams D.L., Hodgetts R.B. 1999 - Effects of reforestation methods on genetic diversity of lodgepole pine. An assesment using microsatelite and randomly amplified polymorphic DNA markers - Theor. Appl. Genet. 98: 793-801.
- 39. WWF World Wide Fund. 2001 - Caspian Hyrcanian mixed forests. Available in http://www.worldwildlife.org/wildworld/profiles/terrestrial/pa/pa0407_full.html#cites.
- 40. Yousefzadeh H., Hosseinzadeh Colagar A., Tabari M., Sattarian A., Assadi M. 2012 - Utility of the ITS region sequence and structure for molecular identification of the Tilia species from Hyrcanian forest, Iran -Plant Syst. Evol. 298: 947-961.
- 41. Zeng J., Zou Y.P., Bai J.Y., Zheng H.S. 2003 - RAPD analysis of genetic variation in natural populations of Betula alnoides from Guangx, China - Euphytica, 134: 33-41.
- 42. Zohary M. 1973 - Geobotanical foundation of the Middle East - Gustav Fische Verlag. Stuttgart, Germany. ASIN B0006CB7Z4.
Typ dokumentu
Bibliografia
Identyfikator YADDA
bwmeta1.element.baztech-ebc91dce-7bdc-4071-bbf7-41083b5fc37e