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Region-based processing of volumetric data

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Warianty tytułu
Języki publikacji
EN
Abstrakty
EN
Measurement of volumetric tomographic data, similar to other measurement techniques, suffers from several classes of artifacts, of which noise presence and the partial volume effect belong to the most prominent ones. These artifacts spoil data analysis and/or visualization, which may, for example in the case of medical imaging, lead to erroneous decisions with severe consequences. We propose a set of tools for region-based processing of volumetric data. Here, the basic entity is a spectrally homogeneous region instead of the traditional voxel. This provides for, on the one hand, higher robustness and, on the other hand, speeds up processing owing to many times smaller amount of elements to work with. Homogeneous regions are in our approach detected by the well-known segmentation by means of the watershed transform. In this paper we present algorithms for streamed computation of watershed transform, which allows for processing of very large data, region-based data smoothing and region merging based on the spectral distance. Further, we present an interactive tool for volume data segmentation and visualization which takes advantage of region hierarchies obtained by a hierarchical watershed transform.
Rocznik
Tom
Strony
247--253
Opis fizyczny
Bibliogr. 12 poz., rys., tab.
Twórcy
autor
  • Comenius University, Bratislava, Slovakia
autor
Bibliografia
  • [1] ACKERMAN M.J., The visible human project, Proceedings of the IEEE, Vol. 86, No. 3, 1998, pp. 504–511.
  • [2] BANKMAN I.N. (ed.), Handbook of Medical Imaging, Processing and Analysis, Academic Press, 2000.
  • [3] GREGSON J., An updateable priority queue [online], Available from: http://jamesgregson.blogspot.com/2010/02/updateable-priority-queue.html [cited July 26, 2011].
  • [4] IBANEZ L., SCHROEDER W., NG L., CATES J., The ITK Software Guide: The Insight Segmentation and Registration Toolkit, Kitware Inc., first edition, 2003.
  • [5] PERONA P., MALIK J.,. Scale-space and edge detection using anisotropic diffusion, IEEE Trans. Pattern. Anal. Machine Intell., Vol. 12, 1990, pp. 629–639.
  • [6] PÁLEŠOVÁ E,. Segmentácia farebných objemových dát pomocou klasifikácie. Master’s thesis, Comenius University Faculty of Mathematics, Physics and Informatics, Bratislava, Slovakia, June 2010, (in Slovak).
  • [7] SCHROEDER W.J., MARTIN K.M., LORENSEN W.E., The Visualization Toolkit, Kitware Inc., third edition, 2004.
  • [8] SRAMEK M., DIMITROV L.I., Segmentation of tomographic data by hierarchical watershed transform, Journal of Medical Informatics and Technologies, Vol. 3, 2002, pp. 161–169.
  • [9] SRAMEK M., DIMITROV L.I., STRAKA M., CERVENANSKY M., The f3d tools for processing and visualization of volumetric data, Journal of Medical Informatics and Technologies, 2004, pp. 71–79.
  • [10] VARCHOLA A., VAŠKO A., SOLČÁNY V., DIMITROV L.I., ŠRÁMEK M., Processing of volumetric data by slice and process-based streaming, in SLAY H., BANGAY S., (ed.), Afrigraph’07, ACM Siggraph, Grahamstown, South Africa, 2007, pp. 101–110.
  • [11] VAŠKO A., ŠRÁMEK M., Optimizing Gaussian filtering of volumetric data using SSE, Concurr. Comput. : Pract. Exper., Vol. 23, No. 1, January 2011, pp. 100–116.
  • [12] VINCENT L., SOILLE P., Watersheds in digital spaces: An efficient algorithm based on immersion simulation, Vol. 13, No. 6, June 1991, pp. 583–598.
Typ dokumentu
Bibliografia
Identyfikator YADDA
bwmeta1.element.baztech-article-PWA4-0016-0028
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