PL EN


Preferencje help
Widoczny [Schowaj] Abstrakt
Liczba wyników
Tytuł artykułu

Evaluation of anthropogenic pollution in river water based on the genetic diversity of Aeromonas Hydrophila

Treść / Zawartość
Identyfikatory
Warianty tytułu
PL
Ocena zanieczyszczenia antropogenicznego wody rzecznej na podstwawie zróżnicowania genetycznego Aeromonas Hydrophila
Języki publikacji
EN
Abstrakty
EN
Aeromonas hydrophila is a valuable indicator of the quality of water polluted by sewage and pathogens that pose a risk for humans and cold-blooded animals, including fi sh. The main aim of this research was to evaluate anthropogenic pollution of river water based on genetic diversity of 82 A. hydrophila strains by means of RAPD, semi-random AP-PCR (ISJ) and the rep-BOX conservative repeats test. Genetic diversity of A. hydrophila was HT = 0.28 (SD = 0.02) for all DNA markers (RAPD, semi random and rep-BOX). None of the analyzed electrophoretic patterns was identical, implying that there were many sources of strain transmission. The presence of genes for aerolysin (aerA), hemolysin (ahh1) and the cytotoxic enzyme complex (AHCYTOGEN) was verifi ed for all tested strains, and drug resistance patterns for tetracycline, enrofl oxacin and erythromycin were determined. The most diverse A. hydrophila strains isolated from river water were susceptible to enrofl oxacine (HS = 0.27), whereas less diverse strains were susceptible to erythromycin (HS = 0.24). The presence of the multidrug resistance marker (ISJ4-25; 1100 bp locus) in the examined strains (resistant to three analyzed drugs) indicates that intensive fi sh cultivation affects the microbiological quality of river water.
PL
Aeromonas hydrophila jest cennym wskaźnikiem jakości wody w przypadku zanieczyszczeń ściekami oraz mikroorganizmami względnie patogennymi dla człowieka i zwierząt zimnokrwistych, w tym ryb. Celem niniejszych badań była ocena zanieczyszczenia antropogenicznego na podstawie zróżnicowania genetycznego 82 szczepów A. hydrophila poprzez analizy RAPD, pół-przypadkowo amplifi kowanej klasy AP-PCR (ISJ) i konserwatywnego powtórzenia rep-BOX. Zróżnicowanie genetyczne A. hydrophila wyniosło HT = 0,28 (SD = 0,02) dla wszystkich markerów DNA (RAPD, pół-przypadkowe i rep-BOX). Wszystkie szczepy dla wszystkich markerów ujawniły indywidualny wzór elektroforetyczny, nie ujawniono jednego źródła rozprzestrzeniania się szczepów. U szczepów potwierdzono obecność genów aerolizyny (aerA), hemolizyny (ahh1) i kompleksu enzymów cytotoksycznych (AHCYTOGEN), jak również określono wzorzec oporności na tetracyklinę, enrofl oksacynę i erytromycynę. Najbardziej zróżnicowane okazały się szczepy A. hydrophila wrażliwe na enrofl oksacynę (HS = 0,27) a najmniej zróżnicowane były szczepy wrażliwe na erytromycynę (HS = 0,24). Wyselekcjonowany marker wielolekooporności (locus ISJ4-25, 1100 pz) obecny u szczepów (opornych na 3 rozpatrywane leki) świadczy o wpływie intensywnej hodowli ryb na jakość mikrobiologiczną wody rzecznej.
Rocznik
Strony
41--50
Opis fizyczny
Bibliogr. 31 poz., tab., wykr.
Twórcy
autor
autor
autor
  • Department of Environmental Microbiology, Faculty of Environmental Sciences M. Oczapowskiego 5; 10-719 Olsztyn, Poland University of Warmia and Mazury in Olsztyn, p2p2@gmx.us
Bibliografia
  • [1] Altwegg M., Reeves M.W., Alwegg-Bissing R., Brenner, D.J.: Multilocus enzyme analysis of the genus Aeromonas and its use for species identification, Zentralblatt für Bacteriologie, 275, 28-45 (1991).
  • [2] Borchardt M.A., Stemper M.E., Standridge J.H.: Aeromonas isolates from human diarrheic stool and groundwater compared by pulsed-field gel electrophoresis, Emerging Infectious Diseases, 9, 224-228 (2003).
  • [3] Boyd E.F., Hiney M.P., Peden J.F., Smith P.R., Caugant D.A.: Assessment of genetic diversity among Aeromonas salmonicida isolates by multilocus enzyme electrophoresis, Journal of Fish Diseases, 17, 97-98 (1994).
  • [4] Chen D.H., Ronald P.C.: A rapid DNA minipreparation method suitable for AFLP and other PCR applications, Plant Molecular Biology Reporter, 17, 53-57 (1999).
  • [5] Chopra I., Roberts M.: Tetracycline antibiotics: mode of action, applications. Molecular biology, and epidemiology of bacterial resistance, Microbiology and Molecular Biology Reviews, 65, 232-260 (2001).
  • [6] Datta S., Khan A., Nandy R.K., Rehman M., Sinha S., Chattopadayay S., Das S.C., Nair G.B.: Environmental isolates of Aeromonas spp. harboring the cagA-like gene of Helicobacter pylori, Applied and Environmental Microbiology, 69, 4291-4295 (2003).
  • [7] Dodd H.N., Pemberton L.M.: Cloning, sequencing, and characterization of the nucH gene encoding anextracellular nuclease from Aeromonas hydrophila JMP636, Journal of Bacteriology, 178, 3926-3933 (1996).
  • [8] Dombek P.E., Johnson L.K., Zimmerley S.T., Sadowsky M.J.: Use of repetitive DNA sequences and the PCR to differentiate Escherichia coli isolates from human and animal sources, Applied and Environmental Microbiology, 66, 2572-2577 (2000).
  • [9] Feizabadi M.M., Robertson I.D., Cousins D.V., Dawson D.J., Hampson D.J.: Use of multilocus enzymeelectrophoresis to examine genetic relationships amongst isolates of Mycobacterium intracellulare and related species, Microbiology, 143, 1461-1469 (1997).
  • [10] Figueras M.J., Soler L., Chacon M.R., Guarro J., Martinez-Murcia A.J.: Extended method for discrimination of Aeromonas spp. by 16S rDNA RFLP analysis, International Journal of Systematic and Evolutionary Microbiology, 50, 2069-2073 (2000).
  • [11] Figueras M.J., Suarez-Franqueta A., Chacon M.R., Soler L., Navarro M., Alejandre C., Grasa B., Martinez-Murcia A.J., Guarro J.: First record of the rare species Aeromonas culicicola from a drinking water supply, Applied and Environmental Microbiology, 71, 538-541 (2005).
  • [12] Giraud E., Blanc G., Bouju-Alberta A., Weill F.X., Donnay-Moreno C.: Mechanisms of quinolone resistance and clonal relationship among Aeromonas salmonicida strains isolated from reared fish with furunculosis, International Journal of Medical Microbiology, 53, 895-901 (2004).
  • [13] Godt M.J.W., Walker J., Hamrick J.L.: Allozyme diversity in Macbridea alba (Lamiaceae), an endemic Florida mint, Heredity, 95, 244-249 (2004).
  • [14] Gołaś I., Korzekwa K., Harnisz M., Zmysłowska I., Teodorowicz M., Terech-Majewska E., Ro dziewicz W., Bieńkowska M.: Influence of fishery management and environment al factors on occurence of heterotrophic, memoltic and mesophilic bacteria and Aeromonas hydrophila in waters of the Drwęca River, Poland, Archives of Environmental Protection, 35, 27-40 (2009).
  • [15] Harnisz M., Gołaś I., Pietruk M.: Tetracycline-resistant bacteria as indicators of antimicrobial resistance in protected waters - the example of the Drwęca River nature reserve (Poland), Ecological Indicators, 11, 663-668 (2011).
  • [16] Hazen T.C., Fliermans C.B.: Distribution of Aeromonas hydrophila in natural and man-made thermal effluents, Applied and Environmental Microbiology, 38, 166-168 (1979).
  • [17] Korzekwa K., Polok K., Zieliński R.: Application of DNA markers to estimate genetic diversity of Mycobacterium tuberculosis strains, Polish Journal of Microbiology, 55, 19-24 (2006).
  • [18] Martin B., Humbert O., Camara M., Guenzi E., Walker J., Mitchell T., Andrew P., Prudhomme M., Alloing G., Hakenbeck R., Morrison D.A., Boulnois G.J., Claverys J-P.: A highly conserved repeated DNA element located in the chromosome of Streptococcus pneumonia, Nucleic Acids Research, 20, 3479-3483 (1992).
  • [19] Nash J.H.E., Findlay W.A., Luebbert C.C., Mykytczuk O.L., Foote S.J., Taboada E.N., Carillo C.D., Boyd J.M., Colquhound D.J., Reith M.E., Brown L.L.: Comparative genomics profiling of clinical isolates of Aeromonas salmonicida using DNA microarrays, BMC Genomics, 7, 43, 1-15 (2006).
  • [20] Nawaz M., Sung K., Khan S.A., Khan A.A., Steele R.: Biochemical and molecular characterization of tetracycline-resistant Aeromonas veronii isolates from Catfish, Applied and Environmental Microbiology, 72, 6461-6466 (2006).
  • [21] Nei M., Graur D.: Extent of protein polymorphism and the neutral mutation theory, Evolutionary Biology, 17, 73-118 (1984).
  • [22] Nei M., Kumar S.: Molecular evolution and phylogenetics, Oxford University Press, New York (2000).
  • [23] Schlüter A., Szczepanowski R., Kurz N., Schneiker S., Krahn I., Pühler, A.: Erythromycin resistance--conferring plasmid pRSB105, isolated from a sewage treatment plant, harbors a new macrolide resistance determinant, an integron-containing Tn402-like lement, and a large region of unknown function, Applied and Environmental Microbiology, 73, 1952-1960 (2007).
  • [24] Seshadri R., Joseph S.W., Chopra A.K., Sha J., Shaw J., Graf J., Haft D., Wu M., Ren Q., Rosovitz M.J., Madupu R., Tallon L., Kim M., Jin S., Vuong H., Stine O.C., Ali A., Horneman A.J., Heidelberg J.F.: Genome Sequence of Aeromonas hydrophila ATCC 7966T: Jack of all trades, Journal of Bacteriology, 188, 8272-8282 (2006).
  • [25] Seurinck S., Verstraete W., Sicilliano S.D.: Use of 16S-23S rRNA intergenic spacer region PCR and repetitive extragenic palindromic PCR analyses of Escherichia coli isolates to identify nonpoint faecal sources, Applied and Environmental Microbiology, 69, 4942-4950 (2003).
  • [26] Tazi L., El Bagdadi J., Lesjean S., Locht C., Supply P., Tibayrenc M., Banuls A.L.: Genetic diversity and population structure of Mycobacterium tuberculosis in Casablanca, a Moroccan city with high incidence of tuberculosis, Journal of Clinical Microbiology, 42, 461-466 (2004).
  • [27] Welsh J., McClelland M.: Fingerprinting genomes using PCR and arbitrary primers, Nucleic Acids Research, 18, 7213-7218 (1990).
  • [28] Williams J.G., Kubelik A.R., Livak K.J., Rafalski J.A., Tingey S.V.: DNA polymorphisms amplified by arbitrary primers are useful as genetic markers, Nucleic Acids Research, 18, 6531-6535 (1990).
  • [29] World Health Organization OECD. Assessing Microbial Safety of Drinking Water: Improving Approaches and Methods, IWA Publishing, Alliance House, London, UK 2003.
  • [30] Xu X.J., Ferguson M.R., Popov V.L., Houston C.W., Peterson J.W., Chopra A.K.: Role of a cytotoxic enterotoxin in Aeromonas-mediated infections: Development of transposon and isogenic mutants, Infection and Immunity, 66, 3501-3509 (1998).
  • [31] Yeh F.C., Boyle T.J.B.: Population genetic analysis of codominant and dominant markers and quantitative traits, Belgian Journal of Botany, 129, 157 (1997).
Typ dokumentu
Bibliografia
Identyfikator YADDA
bwmeta1.element.baztech-article-BUS8-0024-0004
JavaScript jest wyłączony w Twojej przeglądarce internetowej. Włącz go, a następnie odśwież stronę, aby móc w pełni z niej korzystać.