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The Relevance of Cell Membranes for P Systems. General Aspects

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Języki publikacji
EN
Abstrakty
EN
This paper presents the stucture, organization (hierarchy) and function of cell membrane in bacteria, with special emphasis on: i) the hierarchy of cell membranes in Gram-negative and Gram-positive bacteria, ii) two main criteria for the classification of transport of ions and molecules across cell membrane, iii) two important mechanisms of transport - symport and antiport, and iv) the relevance of these biological realities for working concepts in P systems such as membrane hierarchy and developmental rules. The biological reality not only illustrates some central concepts in P systems but also could give some suggestions for the theoretical development of P systems and their possible implementation.
Słowa kluczowe
Wydawca
Rocznik
Strony
35--43
Opis fizyczny
bibliogr. 25 poz.
Twórcy
  • Institute of Biology of the Romanian Academy Centre of Microbiology Splaiul Independentei 296 POBox 56-53 Bucharest 79
Bibliografia
  • [1] J.P. Armitage, Bacterial tactic responses, Adv. Microb. Physiol., 41 (1999), 229-289.
  • [2] M.G. Boersema, I.P. Solyanikova, W.J. Van Berkes, J. Vervoort, L.A. Golovleva, I.M Rietjens, 19F NMR metabolimics for the elucidation of microbial degradation pathways of fluorophenols, J. Ind. Microbiol. Biotechnol., 26 (2001), 22-34.
  • [3] I.R. Booth, Bacterial transport: energetics and mechanisms. In Bacterial Energy Transduction (Anthony C., ed.), Academic Press, London, 1988, 377^428.
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  • [5] S.G.Edwards, B. Seddon, Mode of antagonism of Brevibacillus brevis against Botrytis cinerea in vitro, J. App. Microbiol., 4, (2001) 652-659.
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  • [7] H.Jung, Towards the molecular mechanism of Na/solute symport in prokaryotes, Biochem. Biophys. Acta, 1505 (2001), 131-143.
  • [8] P. Kellam, Post-genomic virology: the impact of the bioinformatics, microarrays and proteomics on investigating host and pathogen interactions, Rev. Med. Virol., 11 (2001), 313-329.
  • [9] DJ.Kelly, G.H. Thomas, The tripartite ATP-independent periplasmic (TRAP) transporters of bacteria and archaea, FEMS Microbiol. Rev., 25 (2001), 404-424.
  • [10] T.R Kievit, R. Gillis, S.Marx, C.Brown, B.H. Iglewski, Qvorumsensing genes in Pseudomonas aeruginosa biofilms: their role and expression patterns, Appl. Environ. Microbiol., 67 (2001), 1865-1873.
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  • [12] F. Meng, B.J. Cargile, L.M. Miller, A.J. Forbes, J.R. Johnson, N.L Kelleher, Informatics and multiplexing of intact protein identification in bacteria and the archaea, Nat. Biotechnol., 19 (2001), 952-957.
  • [13] J.Michiels, G.Dirix, J. Vanderleyden, C.Xi, Processing and export of peptide pheromones and bacteriocins in Gram-negative bacteria, Trends in Microbiol., 9(2001), 164-168.
  • [14] H.L. Packer, J.P. Armitage, Behavioral response of Rhodobacter spheroides to linear gradient of the nutrients succinate and acetate, Appl. Environ. Microbiol., 66 (2001), 5186-5191.
  • [15] H.L. Packer, J.P. Armitage, Inverted behavioral responses in wild-type Rhodobacter spheroides to temporal stimuli, FEMS Microbiol. Lett., 185 (2000), 299-304.
  • [16] E.Padan, M. Venturi, Y.Gercham, N.Dover, Na/H antiporters, Biochem. Biophys. Acta, 1505 (2001), 144-157.
  • [17] Gh. P&un, Computing with membranes, J. Computer and System Sciences, 61 (2000), 108-143. [18] Gh. PSun, From cells to computers: computing with membranes (P systems), Biosystems, 59 (2001), 139— 158.
  • [19] L.M. Raamsdonk, B. Teusink, D. Broadhurst, N. Zhang, A. Hayes, M.C. Walsh, J.A. Berden, K.M. Brindle, D.B. Kell, J.J. Rowland, H.V. Westerhoff, K. van Dam, S.G. Oliver, A functional genomics strategy that uses metabolome data to reveal the phenotype of silent mutations, Nat. Biotechnol., 19 (2001), 45-50.
  • [20] M.H.Saier, Genome archeology leading to the characterization and classification of transport proteins, Curr. Op. Microbiol., 2(1999), 555-561.
  • [21] C. Schaffer, M. Graninger, P.Messner, Prokaryotic glycolsylation, Proteomics, 2 (2001), 248-261.
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  • [24] C.M. Tang, E.R. Moxon, The impact of microbial genomics on antimicrobial drug development, Annu Rev Genomics Hum Genet., 2 (2001), 25 9-269.
  • [25] M.P. Washburn, J.R. Yates, Analysis of the microbial proteome, Curr. Op. Microbiol., 3 (2000), 29 2-297.
Typ dokumentu
Bibliografia
Identyfikator YADDA
bwmeta1.element.baztech-article-BUS2-0003-0099
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