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Computational study of substrate isotope effect probes of transition state structure for acetylcholinesterase catalysis

Treść / Zawartość
Identyfikatory
Warianty tytułu
Konferencja
Proceedings of the International Conference “2001 an Isotope Odyssey: New Application for a New Millenium", June 24-29, 2001, Zakopane, Poland
Języki publikacji
EN
Abstrakty
EN
Secondary isotope effects for carbonyl addition reactions of methyl thioacetate, acetone and acetaldehyde have been calculated by ab initio quantum mechanical methods in an effort to interpret measured beta-deuterium isotope effects on acetylcholinesterase- catalyzed hydrolysis of acetylthiocholine. The calculated beta-deuterium isotope effect for equilibrium addition of methanol to methyl thioacetate is D3Keq = 0.965, and the corresponding effect for addition of methoxide ion to methyl thioacetate wherein three waters are hydrogen bonded to the carbonyl oxyanion is D3Keq = 1.086. Neither of these calculated isotope effects is as inverse as the experimental beta-deuterium isotope effect for acetylcholinesterase-catalyzed hydrolysis of acetylthiocholine, D3kE = 0.90š0.03. Structural comparisons show that the water-solvated methoxide adduct of methyl thioacetate is more expanded than is the neutral methanol addition adduct, and suggest that the degree to which the isotope effect is inverse (i.e. less than) is inversely correlated to the degree of expansion of the adduct. A similar correlation of beta-deuterium and beta-deuterium secondary isotope effects with the degree of expansion of the adducts is found for equilibrium additions of methanol and methoxide ion to acetaldehyde. These computational results suggest that the markedly inverse beta-deuterium isotope effect for the acetylcholinesterase reaction arises from enzymic compression of the transition state.
Czasopismo
Rocznik
Strony
9--12
Opis fizyczny
Bibliogr. 20 poz., rys.
Twórcy
autor
  • The University of Iowa, Department of Chemistry, 315 CB, Iowa City, IA 52242, USA, Tel.: 319 335 1335, Fax: 319 335 1270
autor
  • The University of Iowa, Department of Chemistry, Iowa City, IA 52242, USA Current address: Neurochemie, Max-Planck-Institut für Hirnforschung, 46 Deutschordenstr., Frankfurt, Germany
autor
  • The University of Iowa, Department of Chemistry, Iowa City, IA 52242, USA Current address: Department of Biochemistry, University of Nebraska, The Beadle Center N113, Lincoln, NE 68588, USA
autor
  • The University of Iowa, Department of Chemistry, 315 CB, Iowa City, IA 52242, USA, Tel.: 319 335 1335, Fax: 319 335 1270
Bibliografia
  • 1. Arnett EM, Cohen T, Bothner-By AA, Bushick RD, Sowinski G 1961) A large beta-deuterium equilibrium isotope effect in the protonation of acetophenone. Chem Ind 473–474
  • 2. Becke AD (1996) Density-functional thermochemistry. IV. A new dynamical correlation functional and implications for exact--exchange mixing. J Chem Phys 104:1040–1046
  • 3. Bigeleisen J, Goepert-Mayer M (1947) Calculation of equilibrium constans for isotopic exchange reactions. J Chem Phys 15:261–267
  • 4. Bigeleisen J, Wolfsberg M (1958) Theoretical and experimental aspects of isotope effects in chemical kinetics. Adv Chem Phys 1:15–76
  • 5. Frisch MJ, Trucks GW, Schlegel HB et al. (1998) Gaussian 98, revision A.6 ed., Gaussian, Inc., Pittsburgh, PA
  • 6. Harel M, Quinn DM, Nair HK, Silman I, Sussman JL (1996) The X-ray structure of a transition state analog complex reveals the molecular origins of the catalytic power and substrate specificity of acetylcholinesterase. J Am Chem Soc 118:2340–2346
  • 7. Hill EA, Milosevich SA (1976) Secondary α-deuterium isotope effects on aldehyde hydrate and hemiacetal formation. Tetrahedron Lett 30:4553–4554
  • 8. Kirkwood JG (1934) Theory of solutions of molecules containing widely separated charges with special application to amphoteric ions. J Chem Phys 2:351–361
  • 9. Kovach IM, Belz M, Larson M, Rousy S, Schowen RL (1985) Transition-state structures for ester aminolysis with and without rate-limiting proton transfer. J Am Chem Soc 107:7360–7365
  • 10. Kovach IM, Hogg JL, Raben T, Halbert K, Rodgers J, Schowen RL (1980) The β-hydrogen isotope effect in acyl transfer reactions. Origins, temperature dependence and utility as a probe of transition-state structure. J Am Chem Soc 102:1991–1999
  • 11. Lee C, Yang W, Parr RG (1988) Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density. Phys Rev B 37:785–789
  • 12. Lewis CA, Wolfenden R (1977) Antiproteolytic aldehydes and ketones: substituent and secondary deuterium isotope effects on equilibrium addition of water and other nucleophiles. Biochemistry 22:4886–4890
  • 13. Malany S, Sawai M, Sikorski RS (2000) Transition state structure and rate determination for the acylation stage of acetylcholinesterase catalyzed hydrolysis of (acetylthio)choline. J Am Chem Soc 122:2981–2987
  • 14. Onsager L (1936) Electric moments of molecules in liquids. J Am Chem Soc 58:1486–1493
  • 15. Pauling L (1946) Molecular architecture and biological reactions. Chem Eng News 24:1375–1377
  • 16. Quinn DM (1987) Acetylcholinesterase: enzyme structure, reaction dynamics and virtual transition states. Chem Rev 87:955–979
  • 17. Redlich O (1935) A general relationship between the vibrational frequencies of isotopic molecules. Calculation of harmonic force constans. Z Physik Chem B28:371–382
  • 18. Schowen RL (1978) Catalytic power and transition state stabilization. In: Gandour RD, Schowen RL (eds) Transition states of biochemical processes. Plenum Press, New York, pp 77–114
  • 19. Stoute VA, Winnik MA (1975) Secondary β-deuterium isotope effects in ketal formation equilibria. Can J Chem 53:3503–3512
  • 20. Wong MW (1996) Vibrational frequency prediction using density functional theory. Chem Phys Lett 256:391–399
Typ dokumentu
Bibliografia
Identyfikator YADDA
bwmeta1.element.baztech-article-BUJ6-0006-0058
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