Tytuł artykułu
Autorzy
Identyfikatory
Warianty tytułu
Języki publikacji
Abstrakty
This work deals with a theoretical study of the interaction between one water molecule with 2-aminopyridine (2-NH2PYR) and 2-aminopyrazine (2-NH2PYZ). The optimized geometries, harmonic vibrational frequencies, binding energies, proton affinities of the heterocyclic nitrogen atom and the deprotonation enthalpies of the NH bonds are calculated by the DFT/B3LYP functional combined with the 6-31+G(d,p) basis set. The two complexes are cyclic. Complex formation results in a marked decrease of the pyramidal character of the amino group. The binding energies with water are -27.8 kJ mol-1 (2-NH2PYR) and -25.2 kJ mol-1 (2-NH2PYZ). The comparison with complexes involving nucleobases and one water molecule indicates that, in contrast with the interaction involving the carbonyl group, there is no correlation between the binding energies and the acidities and basicities of the sites involved in the interaction. The results are discussed in terms of marked angular differences of the hydrogen bonds forming the closed ring.
Słowa kluczowe
Wydawca
Czasopismo
Rocznik
Tom
Strony
1649--1658
Opis fizyczny
Bibliogr. 30 poz., rys.
Twórcy
autor
- Department of Chemistry, University of Leuven, 200F Celestijnenlaan, B-3001 Heverlee, Belgium
autor
- Department of Chemistry, University of Leuven, 200F Celestijnenlaan, B-3001 Heverlee, Belgium
Bibliografia
- 1. Estrin D.A., Paglieri L. and Corongiu G., J. Phys. Chem., 98, 5653 (1994).
- 2.Sponer J. and Hobza P.,.J.. Phys. Chem., 98, 3161 (1994).
- 3.Florian J. and Leszczynski J., J. Am. Chem. Soc., 120, 5024 (1998).
- 4.Blutsky O., Sponer J.. Leszczynski J., Spirko V.S. and Hobza P., J. Chem. Phys., 105, 11042 (1996).
- 5.Gorb L. and Leszczynski J., J. Am. Chem. Soc., 120, 5024 (1998).
- 6.Chandra A.K., Nguyen M.T., Uchimaru T. and Zeegers-Huyskens Th., J. Phys. Chem. A, 103, 8853 (1999).
- 7.Chandra A.K., Nguyen M.T. and Zeegers-Huyskens Th., J. Mol. Struct., 519, 1 (2000).
- 8.Chandra A.K., Nguyen M.T. and Zeegers-Huyskens Th., J. Mol. Struct., 555, 61 (2000).
- 9. Del Bene J.E., J. Am. Chem. Soc., 101, 7146 (1979).
- 10. Becke A.D., J. Chem. Phys., 98, 5648 (1993).
- 11. Becke A.D., J. Chem. Phys., 104, 1040 (1996).
- 12. Lee C., Yang W. and Parr R.G., Phys. Rev., B 37, 785 (1988).
- 13. Kurinovich M.A. and Lee J.K., J. Am. Chem. Soc., 122, 6258 (2000).
- 14. Boys S.F. and Bemardi F., Mol. Phys., 19, 553 (1970).
- 15. Frisch M.F., Trucks G.W., Schlegel H.B., Gill P.M.W., Johnson B.G., Robb M.A., Cheeseman J.R, Keith T., Peterson G.A., Montgomery J.A., Raghavachary K., Al-Laham M.A., Zakrewski V.G., Orti J.V., Foresman J.B., Ciolowski J., Stefanov B.B., Nanayakkara A., Challacombe M., Peng C.Y., Ayai P. Y., Chen W., Wong M. W., Andres J.L., Repogle E.S., Gomperts R., Martin R.L., Fox D.J., Binkley J.S. Defrees DJ., Baker J., Stewart J.P., Head-Gordon M., Gonzales C., Pople J.A., Gaussian 94, Revisioi C3; Gaussian Inc., Pittsburgh, PA, 1995.
- 16. Bludsky O., Sponer J., Leszczynski J., Spirko V. and Hobza P., J Chem. Phys., 105, 11042 (1996).
- 17. Chao M., Schempp E. and Rosenstein R.D., Ada Crysl., B31, 2922 (1975).
- 18. van Mourik T., Price S.L. and Clary D.C., J. Phys. Chem. A, 103, 1611 (1999)
- 19. Denisov G. and Kuzina L.A,,J. Mol. Struct., 271, 9 (1992).
- 20. All the intermolecular distances and angles as well as the vibrational frequencies and infrared and intensities are available from the authors, on request.
- 21. Florian J., Baumruk V. and Leszczynski J., J. Phys. Chem. 100, 5578 (1996).
- 22. Aamouche A., Ghomi M., GrajarL., Baron M.H., Romain F., Baumruk V., Stepanek J., Coulombeau C. J., Jobic H. and Berthier G., J. Phys. Chem. A, 101, 10063 (1997) and references therein.
- 23. Kwiatkowski J.S. and Leszczynski J., J. Phys. Chem., 100, 941 (1996).
- 24. Meot-Ner M., J. Am. Chem. Soc., 110, 3071 (1980).
- 25. Aue D., Webb H.M., Davidson W.R., Toure P., Hopkins H.P., Moulik S.P. and Jahagirdar D.V., J. Am, Chem. Soc., 113, 1770 (1991).
- 26. Hopkins H.P. and Ali S.Z., J. Phys. Chem., 82, 1268 (1978).
- 27. Käsende O. and Zeegers-Huyskens Th., Spectrosc. Lett., 13, 493 (1980).
- 28. Smets J., McCarthy W., Maes G. and Adamowicz L., J. Mol. Struct., 476, 27 (1999).
- 29. Papai I. and Jancsö G., J. Phys. Chem. A, 104, 2132 (2000).
- 30. Rauhut G., Phys. Chem. Chem. Phys., 5 , 791 (2003).
Typ dokumentu
Bibliografia
Identyfikator YADDA
bwmeta1.element.baztech-article-BUJ1-0022-0029