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Phylogenetic diversity of bacteria and Archaea associated with the marine sponge Pachychalina sp.

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Warianty tytułu
Języki publikacji
EN
Abstrakty
EN
Molecular techniques were employed to document the microbial diversity associated with the marine sponge Pachychalina sp. from South China Sea in March 2003. Using the total microbial DNA as template, bacterial and archaeal 16S rDNAs were amplified by PCR with universal primers. Amplified products were cloned, sequenced and secondarily amplified by PCR. Then the secondarily amplified products were purified to be further characterized by amplified rDNA restriction analysis (ARDRA). According to the enzyme restriction mapping, the apparent difference among them were disclosed. 22 bacterial cloned partial sequences were acquired and most of them were related to proteobacterium. Also, 7 archaeal cloned partial sequences were acquired and a phylogenetic tree was built up.Result shows the prolific bacterial and archaeal diversity of marine sponge Pachychalina sp.
Rocznik
Strony
505--510
Opis fizyczny
Bibliogr. 12 poz.,
Twórcy
autor
autor
autor
autor
autor
autor
  • Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou 571101, P. R. China, bsxhhq@yahoo.com.cn
Bibliografia
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  • Hentschel U., Hopke J., Horn M, Friedrich A.B., Wagner M., Moore B.S. 2002 - Molecular evidence for a uniform microbial community in sponges from different oceans – Appl. Environ. Microbiol. 68: 4431–4440.
  • Jukes T.H., Cantor C.R. 1969 – Evolution of protein molecules. Mammalian Protein Metabolism – Academic Press, New York, pp. 21–132.
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  • Moran M.A., Rutherford L.T., Hodson R.E. 1995 – Evidence for indigenous Streptomyces populations in a marine environment determined with a 16S rRNA probe – Appl. Environ. Microbiol. 61: 3695–3700.
  • Nicole S. Wilson K.J. , Blackall L.L., Hill R.T. 2001 – Phylogenetic diversity of bacteria associated with the marine sponge Rhopaloeides odorabile – Appl. Environ. Microbiol. 67 (1): 434–444.
  • Olson J.B., Dedra K.H., Asim K.B., Mc-Carthy P.J. 2007 – Tsukamurella spongiae sp. nov., a novel actinomycete isolated from a deep-water marine sponge – Int. J. Syst. Evol. Microbiol. 57: 1478–1481.
  • Perry N.P., Ettouati L., Litaudon M., Blunt J.W., Munro M.H.G. 1994 – Alkaloids from the Antarctic sponge Kirkpatrickia varialosa. Part 1. Variolin B, a new antitumour and antiviral compound – Tetrahedron, 50: 3987–3992.
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Typ dokumentu
Bibliografia
Identyfikator YADDA
bwmeta1.element.baztech-article-BGPK-2162-8394
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