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Program package MP-ZAVA for parallel quantum-chemical computing in the spd-basis

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Warianty tytułu
Języki publikacji
EN
Abstrakty
EN
A parallel realization of the NDDO-WF technique for semi-empirical quantum-chemical calculations on large molecular systems in the spd-basis is described. The technological aspects of designing scalable parallel calculations on super computers (by using MPI library) are discussed. The scaling of individual algorithms and entire package was carried out for two model systems with a number of atomic orbitals of 894 and 2014, respectively. The speedup was determined in computer experiments with the RM600 E60 and Cluster Intel PIII multi-processor systems. The effect of communication rate on the package performance is discussed.
Rocznik
Strony
271--300
Opis fizyczny
Bibliogr. 68 poz., rys., tab.
Twórcy
  • Institute of Problems of Chemical Physics, Russian Academy of Sciences, Chernogolovka, Moscow, 142432 Russia
autor
  • Institute of Problems of Chemical Physics, Russian Academy of Sciences, Chernogolovka, Moscow, 142432 Russia
  • Institute of Problems of Chemical Physics, Russian Academy of Sciences, Chernogolovka, Moscow, 142432 Russia
autor
  • Russian University of Peoples’ Friendship, Miklukho-Maklaya 6, Moscow, 117302 Russia
Bibliografia
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  • [24] Khavryutchenko V D, Nikitina E A, Sheka E F, Barthel H and Weis J 1998 Phys. Low-Dim. Struct. 5/6 1; 1999 9/10 1
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  • [35] Sheka E, Khavrytchenko V and Nikitina E 1996 J. Chem. Vap. Dep. 5 1; Phys. Low-Dim. Struct. 11/12 65
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  • [37] Khavryutchenko V, Sheka E, Aono M and Huang D 1996 Phys. Low-Dim. Struct. 9/10 15; 1996 11/12 1; 1998 3/4 81
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  • [39] Zayets V A and Sheka E F to be published
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  • [41] Abramowitz M, Stegun I A Eds. 1964 Handbook of Mathematical Functions with Formulae, Graphs and Mathematical Tables, National Bureau of Standards Applied Mathematics Series, No. 55
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  • [53] Sheka E F, Khavryutchenko V D and Zayets V A 1996 Int. J. Quant. Chem. 57 741
  • [54] Berzigiyarov P K 2000 Proc. II All-Russia School on Supercomputing Systems and Information Technologies for Physics and Chemistry, Nov. 1 – 2, Chernogolovka, p. 85
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  • [58] Sheka E, Nikitina E, Zayets V, Schoonman J and Goossens A 2000 Nanoparticles: Applications in Materials Science and Environmental Science & Engineering, Proc. Third Joint ESF-NSF Symposium, Dublin, September 6, 2000, Fissan H, Ed., ESF, p. 35
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  • [62] Strohmaier E, Dongara J J, Meuer H W and Simon H D 1999 Parallel Compt. 25 1517
  • [63] Thole C-E and Stuben K 1999 Parallel Compt. 25 2015
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  • [67] Fletcher G D, Guest M F, Rendell A P and Sherwood P in Molecular Modelling through Parallelism, EUROPORT 2 Consortium, IMMP
  • [68] Berzigiyarov P K, Zayets V A, Razumov V F and Sheka E F 2000 NANOPACK Quantum-Chemical Software for Parallel Computing, Institute of Chemical Physics Problems, Russ. Acad. Sci.
Typ dokumentu
Bibliografia
Identyfikator YADDA
bwmeta1.element.baztech-article-BAT3-0014-0014
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