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Properties of mobile elements of genomes and their application in biotechnology

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EN
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24--36
Opis fizyczny
Bibliogr. 149, rys.
Twórcy
autor
  • Laboratory of Genetics and Marine Biotechnology, Institute of Oceanology, Polish Academy of Sciences, Powstańców Warszawy 55, 81-712 Sopot, Poland, anita@iopan.gda.pl
Bibliografia
  • Agrawal, A., Q.M. Eastman, D.G. Schatz. 1998. Transposition mediated RAG1 and RAG2 and its implications for the evolution of the immune system. Nature 394: 744-751.
  • Alix, K., C.D. Ryder, J. Moore, G.J. King, J.S. Heslop-Harrison. 2005. The genomic organization of retrotransposons in Brassica olaracea. Plant Molecular Biology 59: 839-851.
  • Arca, B., C. Savakis. 2000. Distribution of the transposable element Minos in the genus Drosophila. Genetica 108: 263-267.
  • Arends, H.M., D. Winstanley, J.A. Jehle. 2005. Virulence and competitiveness of Cydia pomonella granulovirus mutants: parameters that do not match. Journal of General Virology 86: 2731-2738.
  • Arkhipova, I.R., M. Meselson. 2000. Transposable elements in sexual and ancient asexual taxa. Proceedings of the National Academy of Sciences of the United States of America 97: 14473-14477.
  • Aronovich, E., J.B. Bell, L.R. Belur. 2007. Sleeping Beauty transposon-mediated correction of mucopolysaccharidosis type I. Molecular Genetics and Metabolism 92: 27.
  • Aronovich, E., J.B. Bell, L.R. Belur, R. Gunther, K. Brenda, S. Kahn, P. Schachern, R. Ehlenfeldt, P. Gupta, C. Carlson, C. Whitley, R.S. McIvor, P. Hackett. 2008. Sleeping Beauty transposonmediated long-term-L-irudonidase expression and correction of lysosomal pathology in NOD/SCID mice with MPS I. Molecular Genetics and Metabolism 93: 15.
  • Auge-Gouillou, C., Y. Bigot, N. Pollet, M.-H. Hamelin, M. Meunier-Rotival, G. Periquet. 1995. Human and other mammalian genomes contain transposons of the mariner family. FEBS Letters 368: 541-546.
  • Biemont, C., F. Lemeunier, M.P. Garcia Guerreiro, J.F. Brookfield, C. Gautier. 1994. Population dynamics of the copia, mdg1, mdg3, gypsy and P transposable elements in a natural population of Drosophila melanogaster. Genetical Research 63: 197-212.
  • Bigot, Y., B. Brillet, C. Auge-Gouillou. 2005. Conservation of palindromic and mirror motifs within inverted terminal repeats of mariner-like elements. Journal of Molecular Biology 351: 108-116.
  • Bowen, N.J., I.K. Jordan. 2002. Transposable elements and the evolution of eukaryotic complexity. Current Issues in Molecular Biology 4: 65-76.
  • Brookfield, J.F., R.M. Badge. 1997. Population genetics models of transposable elements. Genetica 52: 281-294.
  • Brown, N.L., L.R. Evans. 1991. Transposition in prokaryotes: transposon Tn501. Research in Microbiology 142: 689-700.
  • Brunet, F., F. Godin, C. Bazin, J.R. David, P. Capy. 1996. The mariner transposable element in natural populations of Drosophila teissieri. Journal of Molecular Evolution 42: 669-675.
  • Butler, M., T. Goodwin, R. Poulter. 2001. An unusual vertebrate LTR retrotransposon from the cod Gadus morhua. Molecular Biology and Evolution 18: 443-447.
  • Capriglione, T., G. Odierna, V. Caputo, A. Canapa, E. Olmo. 2002. Characterization of a Tc1-like transposon in the Antarctic icefish, Chiondraco hamatus. Gene 295: 193-198.
  • Capy, P., T. Langin, D. Higuet, P. Maurer, C. Bazin. 1997. Do the integrases of LTR-retrotransposons and class II element transposases have a common ancestor? Genetica 100: 63-72.
  • Capy, P., G. Gasper, C. Biemont, C. Bazin. 2000. Stress and transposable elements: co-evolution or useful parasites? Heredity 85: 101-106.
  • Casse, N., Q.T. Bui, V. Nicolas, S. Renault, Y. Bigot, M. Laulier. 2006. Species sympatry and horizontal transfer of mariner transposons in marine crustacean genomes. Molecular Phylogenetics and Evolution 40: 609-619.
  • Cavalier-Smith, T., M.J. Beaton. 1999. The skeletal function of nongenic nuclear DNA: new evidence from ancient cell chimaeras. Genetica 106: 3-13.
  • Charlesworth, B., A. Lapid, D. Canada. 1992. The distribution of transposable elements within and between chromosomes in a population of Drosophila melanogaster: interferences in the nature of selection against elements. Genetical Research 60: 115-130.
  • Charlesworth, B., P. Sniegowski, W. Stephan. 1994. The evolutionary dynamics of repetitive DNA in eukaryotes. Nature 371: 215-220.
  • Clark, K.J., A.M. Geurts, J.B. Bell, P. Hackett. 2004. Transposon vectors for gene-trap insertional mutagenesis in vertebrates. Genesis 39: 225-233.
  • Collier, L.S., C.M. Carlson, S. Ravimohan, A.J. Dupuy, D.A. Largaespada. 2005. Cancer gene discovery in solid tumors using transposonbased somatic mutagenesis in the mouse. Nature 436: 272-276.
  • Cui, Z., A.M. Geurts, G. Liu., D. Kaufman, P.B. Hackett. 2002. Structure-function analysis of the inverted terminal repeats of the sleeping beauty transposon. Journal of Molecular Biology 318: 1221-1235.
  • Dalle Nogare, D.E., M.S. Clark, G. Elgar, I.G. Frame, R.T.M. Poulter. 2002. Xena, a full-length basal retroelement from tetraodontid fish. Molecular Biology and Evolution 19: 247-255.
  • Daniels, S.B., K.R. Peterson, L.D. Strausbaugh, M.G. Kidwell, A. Chovnick. 1990. Evidence for horizontal transmission of the P transposable element between Drosophila species. Genetics 124: 339-355.
  • Davidson, A.E., D. Balciunas, D. Mohn, J. Shaffer, S. Hermanson, S. Sivasubbu, M.P. Cliff, P.B. Hackett, C. Ekker. 2003. Efficient gene delivery and gene expression in zebrafish using the sleeping beauty transposon. Developmental Biology 263: 191-202.
  • de Almeida, L.M., C.M.A. Carareto. 2005. Multiple events of horizontal transfer of Minos transposable element between Drosophila species. Molecular Phylogenetics and Evolution 35: 583-594.
  • de Boer, J.G., R. Yazawa, W.S. Davidson, B.F. Koop. 2007. Bursts and horizontal evolution of DANN transposons in the speciation of pseudotetraploid salmonids. BMC Genomics 8: 422.
  • Deininger, P.L., M.A. Batzer. 1999. Alu repeats and human disease. Molecular Genetics and Metabolism 67: 183-193.
  • Doolittle, W.F., C. Sapienza. 1980. Selfish genes, the phenotype paradigm and genome evolution. Nature 284: 601-603.
  • Dupuy, A.J., K. Clark, C.M. Carlson, S. Fritz, A.E. Davidson, K.M. Markley, K. Finley, C.F. Fletcher, S.C. Ekker, P.B. Hackett, S. Hom, D.A. Largaespeda. 2002. Mammalian germ-line transgenesis by transposition. Proceedings of the National Academy of Sciences of the United States of America 99: 4495-4499.
  • Dupuy, A.J., K. Akagi, D.A. Largaespeda, N.G. Copeland, N.A. Jenkins. 2005. Cancer biology: Sleeping Beauty awakens. Nature 436: 184-186.
  • Edgell, D.R., N.M. Fast, W.F. Doolittle. 1996. Selfish DNA: the best defense is a good offence. Current Biology 6: 385-388.
  • Eickbush, T.H., A.V. Furano. 2002. Fruit flies and human respond differently to retrotransposons. Current Opinion in Genetics & Development 12: 669-674.
  • Eickbush, T.H., V.K. Jamburuthugoda. 2008. The diversity of retrotransposons and the properties of their reverse transcriptases. Virus Research 134: 221-234.
  • Evgenev, M.B., H. Zelentsova, N. Shostak, M. Kozitsina, V. Barskyi, D.H. Lankenau, V.G. Corces. 1997. Penelope, a new family of transposable elements and its possible role in hybrid disgenesis in Drosophila virilis. Proceedings of the National Academy of Sciences of the United States of America 94: 196-201.
  • Feschotte, C., L. Swamy, S.R. Wessler. 2003. Genome-wide analysis of mariner-like transposable elements in rice reveals complex relationships with Stowaway miniature inverted repeat transposable elements (MITEs). Genetics 163: 747-758.
  • Filee, J., P. Siguier, M. Chandler. 2007. Insertion sequence diversity in Archaea. Microbiology and Molecular Biology Reviews 71: 121-157.
  • Finnegan, D.J. 1989. Eukaryotic transposable elements and genome evolution. Trends in Genetics 5: 103-107.
  • Finnegan, D.J. 1992a. Transposable elements. Current Opinion in Genetics and Development 2: 861-867.
  • Finnegan, D.J. 1992b. The genome of Drosophila melanogaster. Academic Press, New York: 1096-1107.
  • Fisher, C., L. Bouneau, J.-P. Coutanceau, J. Weissenbach, J.-N. Volff, C. Ozouf-Costaz. 2004. Global heterochromatic colocalization of transposable elements with minisatellites in the compact genome of the pufferfish Tetraodon nigroviridis. Gene 336: 175-183.
  • Franz, G., C. Savakis. 1991. Minos, a new transposable element from Drosophila hydei, is a member of the Tc1-like family of transposon. Nucleic Acids Research 19: 6646.
  • Furano, A.V., D.D. Duvernell, S. Boissinot. 2004. L1 (LINE-1) retrotransposon diversity differs dramatically between mammals and fish. Trends in Genetics 20: 9-14.
  • Garcia-Fernandez, J., G. Marfany, J. Baguna, E. Salo. 1993. Infiltration of mariner elements. Nature 364: 109-110.
  • Garcia-Fernandez, J., J.R. Bayascas-Ramirez, G. Marfany, A.M. Munoz-Marmol, A. Casali, J. Baguna, E. Salo. 1995. High copy number of highly similar mariner-like transposons in planarian (Platyhelminthe): evidence for a trans-phyla horizontal transfer. Molecular Biology and Evolution 12: 421-431.
  • Gardner, M.J., N. Hall, E. Fung, O. White, M. Berriman, R.W. Hyman, J.M. Carlton, A. Pain, K.E. Nelson, S. Bowman, I.T. Paulsen, K. James, J.A. Eisen, K. Rutherford, S.L. Salzberg, A. Craig, S. Kyes, M.-S. Chan, V. Nene, S.J. Shallom, B. Suh, J. Peterson, S. Angiuoli, M. Pertea, J. Allen, J. Selengut, D. Haft, M.W. Mather, A.B. Vaidya, D.M.A. Martin, A.H. Fairlamb, M.J. Fraunholz, D.S. Roos, S.A. Ralph, G.I. McFadden, L.M. Cummings, G.M. Subramanian, C. Mungall, J.C. Venter, D.J. Carucci, S.L. Hoffman, C. Newbold, R.W. Davis, C.M. Fraser, B. Barrell. 2002. Genome sequence of the human malaria parasite Plasmodium falciparum. Nature 419: 498-511.
  • Garza, D., M. Medhora, A. Koga, D.L. Hartl. 1991. Introduction of the transposable element mariner into the germline of Drosophila melanogaster. Genetics 128: 303-310.
  • Geurts, A.M., Y. Yang, K.J. Clark, G. Liu, Z. Cui, A.J. Dupuy, J.B. Bell, D.A. Largaespada, P.B. Hackett. 2003. Gene transfer into genomes of human cells by the Sleeping Beauty transposon system. Molecular Therapy 8: 108-117.
  • Goodier, J.L., S.D. Davidson. 1994. Tc1 transposon-like sequences are widely distributed in salmonids. Journal of Molecular Biology 241: 26-34.
  • Gottgens, B., L.M. Barton, D. Grafham, M. Vaudin, A.R. Green. 1999. Tdr 2, a new zebrafish transposon of the Tc1 family. Gene 239: 373-379.
  • Grabher, C., T. Henrich, T. Sasado, A. Arenz, J. Wittbrodt, M. Furutani-Seiki. 2003. Transposon-mediated enhancer trapping in medaka. Gene 322: 57-66.
  • Hani, J., H. Feldmann. 1998. tRNA genes and retroelements in the yeast genome. Nucleic Acids Research 26: 689-696.
  • Hartl, D.L., A.R. Lohe, E.R. Lazovskaya. 1997. Modern thoughts on an ancient mariner: function, evolution, regulation. Annual Review of Genetics 31: 337-358.
  • Heierhorst, J., K. Lederis, D. Richter. 1992. Presence of a member of the Tc1-like transposon family from nematodes and Drosophila within the vasoticin gene of a primitive vertebrate, the Pacific hagfish Eptatretis stouti. Proceedings of the National Academy of Sciences of the United States of America 89: 6798-6802.
  • Henikoff, J. 1992. Detection of Caenorhabditis transposons homologs in diverse organisms. New Biology 4: 382-388.
  • Hickey, D.A. 1982. Selfish DNA: a sexually transmitted nuclear parasite. Genetics 101: 519-531.
  • Hirsch, H., H. Saedler, P. Starlinger. 1972. Insertion mutations in the control region of the galactose operon of E. coli. Molecular and General Genetics 115: 266-276.
  • Hoogland, C., C. Biemont. 1996. Chromosomal distribution of transposable elements in Drosophila melanogaster: test of the ectopic recombination model for maintance of insertion site number. Genetics 144: 197-204.
  • Hurst, G.D.D., J.H. Werren. 2001. The role of selfish genetic elements in Eukaryotic evolution. Nature Reviews Genetics 2: 597-606.
  • Ivics, Z., Z. Izsvak, A. Minter, P.B. Hackett. 1996. Identification of functional domains and evolution of Tc1-like transposable elements. Proceedings of the National Academy of Sciences of the United States of America 93: 5008-5013.
  • Ivics, Z., P.B. Hackett, R.H. Plasterk, Z. Izsvak. 1997. Molecular reconstruction of Sleeping Beauty, a Tc1-like transposon from fish, and its transposition in human cells. Cell 91: 501-510.
  • Ivics, Z., C.D. Kaufman, H. Zayed, C. Miskey, O. Walisko, Z. Izsvak. 2004. The sleeping beauty transposable element: evolution, regulation and genetic applications. Current Issues in Molecular Biology 6: 43-56.
  • Izsvak, Z., Z. Ivics, P.B. Hackett. 1995. Characterization of a Tc1-like transposable element in zebrafish (Danio rerio). Molecular and General Genetics 247: 312-322.
  • Izsvak, Z., Z. Ivics, R.H. Plasterk. 2000. Sleeping beauty, a wide hostrange transposon vector for genetic transformation in vertebrates. Journal of Molecular Biology 302: 93-102.
  • Jacobson, J.W., D.L. Hartl. 1985. Coupled instability of two X-linked genes in Drosophila mauritiana: and somati mutability. Genetics 111: 57-65.
  • Jacobson, J.W., M.M. Medhora, D.L. Hartl. 1986. Molecular structure of a somatically unstable transposable germinal element in Drosophila. Proceedings of the National Academy of Sciences of the United States of America 83: 8684-8688.
  • Jehle, J.A., A. Nickel, J.M. Vlak, H. Backhaus. 1998. Horizontal escape of the novel Tc1-like Lepidopteran transposon TCp3.2 into Cydia pomonella Granulovirus. Journal of Molecular Evolution 46: 215-224.
  • Jurka, J., A.J. Gentles. 2006. Origin and diversification of minisatellites derived from human Alu sequences. Gene 365: 21-26.
  • Kajikawa, M., N. Okada. 2002. LINEs mobilize SINEs in the eel through a shared 3' sequence. Cell 111: 433-444.
  • Kajikawa, M., K. Ichiyanagi, N. Tanaka, N. Okada. 2005. Isolation and characterization of active LINE and SINEs from the eel. Molecular Biology and Evolution 22: 673-682.
  • Kawagoe-Takaki, H., N. Nameki, M. Kajikawa, N. Okada. 2006. Probing the secondary structure of salmon SmaI SINE RNA. Gene 365: 67-73.
  • Kawakami, K. 2005. Transposon tools and methods in zebrafish. Developmental Dynamics 234: 244-254.
  • Kazazian, Jr., H.H. 1998. Mobile elements and disease. Current Opinion in Genetics & Development 8: 343-350.
  • Kazazian, H. 2004. Mobile elements: drivers of genome evolution. Science 303: 1626-1632.
  • Ketting, R.F., S.E.J. Fischer, R.H.A. Plasterk. 1997. Target choice determinants of the Tc1 transposon of Caenorhabditis elegans. Nucleic Acids Research 25: 4041-4047.
  • Kidwell, M.G. 1992. Horizontal transfer. Current Opinion in Genetics and Development 2: 868-873.
  • Kidwell, M.G. 2002. Transposable elements and the evolution of genome size in eukaryotes. Genetica 115: 49-63.
  • Krieger, M.J.B., K.G. Ross. 2003. Molecular evolutionary analyses of mariners and other transposable elements in fire ants (Hymenoptera: Formicidae). Insect Molecular Biology 12: 155-165.
  • L’Abee-Lund, T.M., H. Sorum. 2000. Functional Tn5393-like tranposon in the R plasmid pBRAS2 from the fish pathogen Aeromonas salmonicida subspecies salmonicida isolated in Norway. Applied and Environmental Microbiology 66: 5533-5535.
  • Lam, W.L., T.-S. Lee, W. Gilbert. 1996a. Active transposition in zebrafish. Proceedings of the National Academy of Sciences of the United States of America 93: 10870-10875.
  • Lam, W.L., P. Seo, K. Robison, S. Virk, W. Gilbert. 1996b. Discovery of Amphibian Tc1-like transposon families. Journal of Molecular Biology 257: 359-366.
  • Lampe, D.J., D.J. Witherspoon, F.N. Soto-Adames, H.M. Robertson. 2003. Recent horizontal transfer of mellifera subfamily mariner transposons into insect lineages representing four different orders shows that selection acts only during horizontal transfer. Molecular Biology and Evolution 20: 554-562.
  • Leaver, M.J. 2001. A family of Tc1 -like transposons from the genomes of fishes and frogs: evidence for horizontal transmission. Gene 271: 203-214.
  • Lerat, E., F. Brunet, C. Bazin, P. Capy. 1999. Is the evolution of transposable elements modular? Genetica 107: 15-25.
  • Le Rouzic, A., P. Capy. 2005. The first steps of transposable elements invasion: parasitic strategy vs. genetic drift. Genetics 169: 1033-1043.
  • Le Rouzic, A., S. Dupas, P. Capy. 2007. Genome ecosystem and transposable elements species. Gene 390: 214-220.
  • Lidholm, D.A., G.H. Gudmundsson, H.G. Boman. 1991. A highly repetitive, mariner-like element in the genome of Hyalophora cecropia. Journal of Biological Chemistry 266: 11518-11521.
  • Liu, Z., P. Li, H. Kucuktas, R. Dunham. 1999. Characterization of nonautonomous Tc1-like transposable elements of channel catfish (Ictalurus punctatus). Fish Physiology and Biochemistry 21: 65-72.
  • Lohe, A.R., D. De Auguiar, D.L. Hartl. 1997. Mutations in the mariner transposase: the D,D(35)E consensus sequence is nonfunctional. Proceedings of the National Academy of Sciences of the United States of America 94: 1293-1297.
  • Makalowski, W., G.A. Mitchell, D. Labuda. 1994. Alu sequences in the coding regions of mRNA: a source of protein variability. Trends in Genetics 10: 188-193.
  • Makalowski, W. 2000. Genomic scrap yard: how genomes utilize all that junk. Gene 259: 61-67.
  • Masuda, K., S. Yamamoto, M. Endoh, Y. Kaneda. 2004. Transposonin dependent increase of trancription by the sleeping beauty transposase. Biochemical and Biophysical Research Communications 317: 796-800.
  • Mátés, L., M.K.L. Chuah, E. Belay, B. Jerchow, N. Manoj, A. Acosta-Sanchez, D.P. Grzela, A. Schmitt, K. Becker, J. Matrai, L. Ma, E. Samara-Kuko, C. Gysemans, D. Pryputniewicz, C. Miskey, B. Fletcher, T. Vandendriessche, Z. Ivics, Z. Izsvák. 2009. Molecular evolution of a novel hyperactive Sleeping Beauty transposase enables robust stable gene transfer in vertebrates. Nature Genetics 41: 753-761.
  • McClintock, B. 1950. The origin and behavior of mutable loci in maize. Proceedings of the National Academy of Sciences of the United States of America 36: 344-355.
  • McClintock, B. 1953. Induction of instability at selected loci in maize. Genetics 38: 579.
  • McClintock, B. 1956. Controlling elements and the gene. Cold Spring Harbor Symposia on Quantitative Biology 21: 197.
  • McDonald, J.F., L.V. Matyunina, S. Wilson, I.K. Jordan, N.J. Bowen, W.J. Miller. 1997. LTR retrotransposons and the evolution of eukaryotic enhancers. Genetica 100: 3-13.
  • Mikkelsen, J.G., S.R. Yant, L. Meuse, Z. Huang, H. Xu, M.A. Kay. 2003. Helpar-independent sleeping beauty transposon - transposase vectors for efficient nonviral gene delivery and persistent gene expression in vivo. Molecular Therapy 8: 654-665.
  • Miskey, C., Z. Izsvak, R.H. Plasterk, Z. Ivics. 2003. The Frog Prince: a reconstructed transposon from Rana pipiens with high transpositional activity in vertebrate cells. Nucleic Acids Research 31: 6873-6881.
  • Miskey, C., Z. Izsvak, K. Kawakami, Z. Ivics. 2005. DNA transposons in vertebrate functional genomics. Cell and Molecular Life Sciences 62: 629-641.
  • Moran, J.V. 1999. Human L1 retrotransposition: insights and peculiarities learned from a cultured cell retrotransposition assay. Genetica 107: 39-51.
  • Okada, N. 1991. SINES: short interspersed repeated elements of the eukaryotic genome. Trends in Ecology and Evolution 6: 358-361.
  • Orgel, L.E., F.H. Crick. 1980. Selfish DNA: the ultimate parasite. Nature 284: 604-607.
  • Palomeque, T., J.A. Carillo, M. Munoz-Lopez, P. Lorite. 2006. Detection of a mariner-like element and a miniature repeat transposable element (MITE) asociated with the heterochromatin from ants of the genus Messor and their possible involvment for satellite DNA evolution. Gene 371: 194-205.
  • Pardue, M.L., O.N. Danilevskaya, K.L. Traverse, K. Lowenhaupt. 1997. Evolutionary links between telomers and transposable elements. Genetica 100: 73-84.
  • Pardue, M.L., S. Rashkova, E. Casacuberta, P.G. DeBaryshe, J.A. George, K.L. Traverse. 2005. Two retrotransposons maintain telomeres in Drosophila. Chromosome Research 13: 443-453.
  • Park, J.-M., G.M. Schneeweiss, H. Weiss-Schneeweiss. 2007. Diversity and evolution of Ty1-copia and Ty3-gypsy retroelements in the non-photosynthetic flowering plants Orobanche and Phelipanche (Orobanchaceae). Gene 387: 75-86.
  • Pickeral, O.K., W. Makalowski, M.S. Boguski, J.D. Boeke. 2000. Frequent human genomic DNA transduction driven by LINE-1 retrotransposition. Genome Research 10: 411-415.
  • Pontecorvo, G., B. Felice, M. Carfagna. 2000. A novel repeated sequence DNA originated from a Tc1-like transposon in water green frog Rana esculenta. Gene 261: 205-210.
  • Prasad, M.D., J. Nagaraju. 2003. A comparative phylogenetic analysis of full-length mariner elements isolated from the Indian tasar silkmouth, Antheraea mylitta (Lepidoptera: saturniidae). Journal of Biosciences 28: 443-453.
  • Radice, A.D., B. Bugaj, D.H.A. Fitch, S.W. Emmons. 1994. Widespread occurrence of the Tc1 transposon family: Tc1-like transposons from teleost fish. Molecular and General Genetics 244: 606-612.
  • Recchia, G.D., R.M. Hall. 1997. Origins of the mobile gene cassettes found in integrons. Trends in Microbiology 5: 389-394.
  • Reed, K.M. 1999. Tc1-like transposable elements in the genome of lake trout (Salvelinus namaycush). Marine Biotechnology 1: 60-67.
  • Robertson, H.M., D.J. Lampe. 1995. Recent horizontal transfer of a mariner transposable element among and between Diptera and Neuroptera. Molecular Biology and Evolution 12: 850-862.
  • Robertson, H.M., K.L. Zumpano. 1997. Molecular evolution of an ancient mariner transposon, Hsmar1, in the human genome. Gene 205: 203-217.
  • Rosenzweig, B., L.W. Liao, D. Hirsh. 1983a. Sequence of the C. elegans transposable element Tc1. Nucleic Acids Research 11: 4201-4209.
  • Rosenzweig, B., L.W. Liao, D. Hirsh. 1983b. Target sequence for the C. elegans transposable element. Nucleic Acids Research 11: 7137-7140.
  • Sanmiguel, P., J.L. Bennetzen. 1998. Evidence that a recent increase in maize genome size was caused by the massive amplification of intergene retrotransposons. Annals of Botany 82: 37-44.
  • Sasakura, Y., S. Awazu, S. Chiba, S. Kano, N. Satoh. 2003. Application of Minos, one of the Tc1/mariner superfamily transposable elements, to ascidian embroys as a tool for insertional mutagenesis. Gene 308: 11-20.
  • Sedensky, M.M., S.J. Hudson, B. Everson, P.G. Morgan. 1994. Identification of a mariner-like repetitive sequence in C. elegans. Nucleic Acids Research 22: 1719-1723.
  • Shapiro, J.A. 1999. Transposable elements as the key to a 21st century view of evolution. Genetica 107: 171-179.
  • Sharov, A.A. 2006. Genome increase as a clock for the origin and evolution of life. Biology Direct 1: 17.
  • Siguier, P., J. Filee, M. Chandler. 2006. Insertion sequences in prokaryotic genomes. Current Opinion in Microbiology 9: 526-531.
  • Silva, J.C., F. Bastida, S.L. Bidwell, P.J. Johnson, J.M. Carlton. 2004. A potentially functional mariner transposable element in the protist Trichomonas vaginalis. Molecular Biology and Evolution 22: 126-134.
  • Simmen, M.W., A. Bird. 2000. Sequence analysis of transposable elements in the sea squirt, Ciona intestinalis. Molecular Biology and Evolution 17: 1685-1694.
  • Sinzelle, L., N. Pollet, Y. Bigot, A. Mazabraud. 2005. Characterization of multiple lineages of Tc1-like elements within the genome of the amphibian Xenopus tropicalis. Gene 329: 187-196.
  • Sinzelle, L., A. Chesneau, Y. Bigot, A. Mazabraud, N. Pollet. 2006a. The mariner transposons belonging to the irritans subfamily were maintained in Chordate genomes by vertical transmission. Journal of Molecular Evolution 62: 53-65.
  • Sinzelle, L., J. Vallin, L. Coen, A. Chesneau, D. Du Pasquier, N. Pollet, B. Demeneix, A. Mazabraud. 2006b. Generation of transgenic Xenopus laevis using the Sleeping Beauty transposon system. Transgenic Research 15: 751-760.
  • Sugano, T., M. Kajikawa, N. Okada. 2006. Isolation and characterization of retrotransposition-competent LINEs from zebrafish. Gene 365: 74-82.
  • Syvanen, M. 1994. Horizontal gene transfer: evidence and possible consequences. Annual Review of Genetics 28: 237-261.
  • Tan, H.M. 1999. Bacterial catabolic transposons. Applied Microbiology and Biotechnology 51: 1-12.
  • Terol, J., M.C. Castillo, M. Bargues, M. Perez-Alonso, R. de Frutos. 2001. Structural and evolutionary analysis of the copia-like elements in the Arabidopsis thaliana genome. Molecular Biology and Evolution 18: 882-892.
  • Tobes, R., E. Pareja. 2006. Bacterial repetitive extragenic palindromic sequences are DNA targets fo insertion sequence elements. BMC Genomics 7: 62.
  • Top, E.M., D. Springael. 2003. The role of mobile genetic elements in bacterial adaptation to xenobiotic organic compounds. Current Opinion in Biotechnology 14: 262-269.
  • Touchon, M., E.P.C. Rocha. 2007. Causes of insertion sequences abundance in prokaryotic genomes. Molecular Biology and Evolution 24: 969-981.
  • Van Gent, D.C., K. Mizuuchi, M. Gellert. 1996. Similarities between initiation of V(D)J recombination and retroviral integration. Science 271: 1592-1594.
  • Vicient, C.M., A.H. Schulman. 2002. Copia-like retrotransposons in the rice genome: few and assorted. Genome Letters 1: 35-47.
  • Volff, J.N., C. Korting, M. Schartl. 2000. Multiple lineages of the non-LTR retrotransposon Rex1 with varying success in invading fish genomes. Molecular Biology and Evolution 17: 1673-1684.
  • Volff, J.N., U. Hornung, M. Schartl. 2001. Fish retroposons related to the Penelope element of Drosophila virilis define a new group of retrotransposable elements. Molecular Genetics and Genomics 265: 711-720.
  • Volff, J.N., L. Bouneau, C. Ozouf-Costaz, C. Fischer. 2003. Diversity of retrotransposable elements in compact pufferfish genomes. Trends in Genetics 19: 674-678.
  • Wadman, S.A., K.J. Clark, P.B. Hackett. 2005. Fishing for answers with transposons. Marine Biotechnology 7: 135-141.
  • Wang, J., L. Song, M.K. Gonder, S. Azrak, D.A. Ray, M.A. Batzer, S.A. Tishkoff, P. Liang. 2006. Whole genome computational comparative genomics: a fruitful approach for ascertaining Alu insertion polymorphisms. Gene 365: 11-20.
  • Weiner, A.M. 2002. SINEs and LINEs: the art of biting the hand that feeds you. Current Opinion in Cell Biology 14: 343-350.
  • Yant, S.R., J. Park, Y. Huang, J.G. Mikkelsen, M.A. Kay. 2004. Mutational analysis of the N-terminal DNA-binding domains of sleeping beauty transposase: critical residues for DNA binding and hyperactivity in mammalian cells. Molecular and Cellular Biology 24: 9239-9247.
  • Yusa, K., J. Takeda, K. Horie. 2004. Enhancement of sleeping beauty transposition by CpG methylation: possible role of heterochromatin formation. Molecular and Cellular Biology 24: 4004-4018.
  • Zeyl, C., G. Bell. 1996. Symbiotic DNA in eukaryotic genomes. Trends in Ecology and Evolution 11: 10-15.
Typ dokumentu
Bibliografia
Identyfikator YADDA
bwmeta1.element.baztech-article-BAR0-0062-0088
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