Microsatellite DNA polymorphism in sturgeon species and their hybrids reared in Polish aquaculture farms

• Autorzy: Fopp-Bayat D. , Luczynski M.
• Języki publikacji: EN

Abstrakty

EN

Highly variable microsatellite DNA loci show high levels of variation per locus and provide molecular markers for species and for populations of small effective size. In this study we applied microsatellite markers to identify specimens belonging to several sturgeon species and their interspecific hybrids. Nine microsatellite loci (Afu-19, Afu-22, Afu-34, Afu-39, Afu-54, Afu-57, Afu-58, Afu-68, Afu-69) were analysed for five species (beluga, Siberian sturgeon, Russian sturgeon, sterlet and paddlefish) and for their three interspecific hybrids: Siberian sturgeon x Russian sturgeon, beluga x sterlet (called bester) and for beluga x bester. Certain alleles at five loci: Afu-22, Afu-39, Afu-54, Afu-57 and Afu-68 were diagnostic for the examined sturgeon species and their interspecific hybrids.

Słowa kluczowe

EN

hybrids; microsatellite DNA; polymorphism; PCR; species identification; sturgeons

PL

jesiotr; identyfikacja gatunkowa; DNA mikrosatelitarne; hybrydy; polimorfizm

• Wydawca: University of Warmia and Mazury in Olsztyn, Poland
• Czasopismo: Environmental Biotechnology
• Rocznik: 2006
• Tom: Vol. 2, No. 1
• Strony: 11--19
• Opis fizyczny: Bibliogr. 40 poz., tab.

Twórcy

autor

Fopp-Bayat D.

autor

Luczynski M.

• Department of Ichthyology, Faculty of Environmental Sciences and Fisheries, University of Warmia and Mazury in Olsztyn, 10-718 Olsztyn, Poland, Tel/fax: [phone],

Bibliografia

• Allendorf, F.W. 1986. Genetic drift and the loss of alleles versus heterozygosity. Zoo Biology 5: 181-190.
• Allendorf, F.W., R.F. Leary, P. Spruell, J.K. Wenburg. 2001. The problems with hybrids: setting conservation guidelines. Trends in Ecology & Evolution 11: 613-622.
• Berg, L.S. 1962. Freshwater Fishes of the USSR and Adjacent Countries. pp. 52-111. Vol.1. (Translated by Israel Program for Scientific Translation, Jerusalem) Oldbourne Press, London.
• Birstein, V.J. 1993. Sturgeons and paddlefishes: threatened fishes in the need of conservation. Conservation Biology 7: 773-787.
• Birstein, V.J., W.E. Bemis. 1997. How many species are there within the genus Acipenser? Environmental Biology of Fishes 48: 157-163.
• Birstein, V.J., W.E. Bemis, J.R. Waldman. 1997a. The threatened status of acipenseriform species: a summary. Environmental Biology of Fishes 48: 427-435.
• Birstein, V.J., R. Hanner, R. DeSalle. 1997b. Phylogeny of the Acipenseriformes: Cytogenetic and molecular approaches. Environmental Biology of Fishes 48: 127-155.
• Birstein, V.J., R. DeSalle. 1998. Molecular phylogeny of Acipenserinae. Molecular Phylogenetics and Evolution 9: 141-155.
• Birstein, V.J., J. Betts, R. DeSalle. 1998a. Molecular identification of Acipenser sturio specimens: a warning note for recovery plans. Biological Conservation 84: 97-101.
• Birstein, V.J., P. Doukakis, B. Sorkin, R. DeSalle. 1998b. Population aggregation analysis of three caviar-producing species of sturgeons and implications for the species identification of black caviar. Conservation Biology 12: 766-775.
• Cornuet, J-M., G. Luikart. 1996. Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data. Genetics 144: 2001-2014.
• DeSalle, R., V.J. Birstein. 1996. PCR identification of black caviar. Nature 381: 197-198.
• Estoup, A. 1998. Application of VNTR and especially microsatellite markers to analysis of genetic structure and relationships among populations and individuals. Advances in Molecular Ecology. Course Information and Lecture Summaries. pp. 33-41, Italy, 20-31 March, 1998.
• Estoup, A., P. Presa, F. Krieg, D. Vaiman, R. Guyomard. 1993. (CT)n and (GT)n microsatellites: A new class of genetic markers for Salmo trutta L. (brown trout). Heredity 71: 488-496.
• Hansen, M.M., D.E. Ruzzante, E.E. Nielsen, K.D. Mensberg. 2000. Microsatellite and mitochondrial DNA polymorphism reveals life-history dependent interbreeding between hatchery and brown trout. Molecular Ecology 9: 583-594.
• Jenneckens, I., J.N. Meyer, G. Hörstgen-Schwark, B. May, A. Ludwig. 2001. A fixed allele at microsatellite LS-39 is characteristic for the black caviar producer Acipenser stellatus. Journal of Applied Ichthyology 17: 39-42.
• Kocher, T.D., W.J. Lee, H. Sobolewska, D. Penman, B. McAndrew. 1998. A genetic linkage map of cichlid fish, the tilapia (Oreochromis niloticus). Genetics 148: 1225-1232.
• Lacy, R.C. 1989. Analysis of founder representation in pedigrees: founder equivalents and founder genome equivalents. Zoo Biology 8: 111-123.
• Ludwig, A., N.M. Belfiore, Ch. Pitra, V. Svirsky, I. Jenneckens. 2001. Genome duplication events and functional reduction of ploidy levels in sturgeon (Acipenser, Huso, Scaphirhynchus). Genetics 158: 1203-1215.
• Luikart, G. L., J. M. Cornuet. 1998. Empirical evaluation of a test for identifying recently bottlenecked populations from allele frequency data. Conservation Biology 12: 228-237.
• Maruyama, T., P.A. Fuerst. 1985. Population bottlenecks and nonequilibrium models in population genetics. II. Number of alleles in a small population that was formed by a recent bottleneck. Genetics 111: 675-689.
• May, B., C.C. Krueger, H.L. Kincaid. 1997. Genetic variation at microsatellite loci in sturgeon: primer sequence homology in Acipenser and Scaphirhynchus. Canadian Journal of Fisheries and Aquatic Sciences 54: 1542-1547.
• McConnel, S.K., L. Hamilton, J. Wright, P. Bentzen. 1994. Polymorphic microsatellite loci from Atlantic salmon (Salmo salar): genetic differentiation of North American and European populations. Canadian Journal of Fisheries and Aquatic Sciences 52: 1863-1872.
• Nei, M. 1987. Molecular Evolutionary Genetics. Columbia University Press, New York, NY, USA.
• Nielsen, J.L. 1996. Molecular genetics and conservation of salmonid biodiversity: Oncorhynchus at the edge of their range. In: Molecular Genetics in Conservation (ed. T.B. Smith, R.K. Wayne), pp. 383-398. Oxford University Press.
• Nielsen, J.L., G.K. Sage. 2001. Microsatellite of the trout of northwest Mexico. Genetica 111: 269-278.
• O’Reilly, P., J.M. Wright. 1995. The evolving technology of DNA fingerprinting and its application to fisheries and aquaculture. Journal of Fish Biology 47 (Suppl. A): 29-55.
• Pikitch, E.K., P. Doukakis, L. Lauck, P. Chakrabarty, D.L. Erickson. 2005. Status, trends and management of sturgeon and paddlefish fisheries. Fish and Fisheries 6: 233-265.
• Pyatskowit, J.D., C.C. Krueger, H.L. Kincaid, B. May. 2001. Inheritance of microsatellite loci in the polyploid lake sturgeon (Acipenser fulvescens). Genome 44: 185-191.
• Rodzen J.A., B. May. 2002. Inheritance of microsatellite loci in the white sturgeon (Acipenser transmontanus). Genome 45: 1064-1076.
• Saiki, R.K., D.H. Gelfand, S. Stoffel, S.J. Scharf, R. Higuchi, G.T. Horn, K.B. Mullis, H.A. Erlich. 1988. Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase. Science 239: 487-491.
• Schneider, S., J.M. Kueffer, D. Roessli, L. Excoffier. 2000. Arlequin: a software for population genetic data analysis. Version 2.000. Genetics and Biometry Laboratory, Department of Anthropology, University of Geneva.
• Schug, M.D., K.A. Wetterstrand, M.S. Gaudette, R.M. Lim, C.M. Hutter, C.F. Aquadro. 1998. The distribution and frequency of microsatellite loci in Drosophila melanogaster. Molecular Ecology 7: 57-70.
• Slettan, A., I. Olakser, O. Lie. 1997. Segregation studies and linkage analysis of Atlantic salmon microsatellites using haploid genetics. Heredity 78: 620-627.
• Smith, C.T., R.J. Nelson, S. Pollard, E. Rubidge, S.J. McKay, J. Rodzen, B. May, B. Koop. 2002. Population genetic analysis of white sturgeon (Acipenser transmontanus) in the Fraser River. Journal of Applied Ichthyology 18: 307-312.
• Streelman, J.T., T.D. Kocher. 2002. Microsatellite variation associated with prolactin expression and growth of salt-challenged tilapia. Physiological Genomics 9: 1-4.
• Tave, D. 1986. Genetics for Fish Hatchery Managers, AVI Publishing Company, Westport, Connecticut, 299 pp.
• Tegelström, H. 1986. Mitochondrial DNA in natural populations: an improved routine for the screening of genetic variation based on sensitive silver staining. Electrophoresis 7: 226-229.
• Tranah G., D.E. Campton, B. May. 2004. Genetic evidence for hybridization of pallid and shovelnose sturgeon. Journal of Heredity 95: 474-480.
• Wirgin I., J. Waldman, J. Stabile, B. Lubinski, T. King. 2002. Comparison of mitochondrial DNA control region sequence and microsatellite DNA analyses in estimating population structure and gene flow rates in Atlantic sturgeon Acipenser oxyrinchus. Journal of Applied Ichthyology 18: 313-319.