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Environmental Application of Reporter-Genes Based Biosensors for Chemical Contamination Screening

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Warianty tytułu
PL
Zastosowanie opartych na genach reporterowych biosensorów w screeningu chemicznych zanieczyszczeń w środowisku
Języki publikacji
EN
Abstrakty
EN
The paper presents results of research concerning possibilities of applications of reporter-genes based microorganisms, including the selective presentation of defects and advantages of different new scientific achievements of methodical solutions in genetic system constructions of biosensing elements for environmental research. The most robust and popular genetic fusion and new trends in reporter genes technology – such as LacZ (β-galactosidase), xylE (catechol 2,3-dioxygenase), gfp (green fluorescent proteins) and its mutated forms, lux (prokaryotic luciferase), luc (eukaryotic luciferase), phoA (alkaline phosphatase), gusA and gurA (β-glucuronidase), antibiotics and heavy metals resistance are described. Reporter-genes based biosensors with use of genetically modified bacteria and yeast successfully work for genotoxicity, bioavailability and oxidative stress assessment for detection and monitoring of toxic compounds in drinking water and different environmental samples, surface water, soil, sediments.
PL
Prezentowana praca przeglądowa zawiera opis możliwości aplikacyjnych biosensorów opartych na genetycznie zmodyfikowanych mikroorganizmach wyposażonych w geny reporterowe. W pracy przedstawiono defekty i zalety nowych naukowych osiągnięć oraz metodologicznych rozwiązań dotyczących genetycznych systemów w biosensorach przeznaczonych do środowiskowego screeningu zanieczyszczeń. Opisano najbardziej użyteczne i popularne genetyczne fuzje sekwencji promotorowych z takimi genami reporterowymi jak: lacZ (β-galaktozydaza), xylE (katechol 2,3-dioxygenaza), gfp (gen białka zielonej fluorescencji) oraz jego zmutowane warianty, lux (prokariotyczna lucyferaza), luc (eukariotyczna lucyferaza), phoA (alkaliczna fosfataza), gusA i gurA (β-glukuronidaza), geny oporności na antybiotyki oraz metale ciężkie. Tego typu mikrobiologiczne biosensory znalazły szerokie zastosowanie w testach genotoksyczności, badaniach nad biodostępnością oraz stresem oksydacyjnym, a także w detekcji i monitoringu substancji toksycznych w wodzie pitnej, różnych próbach środowiskowych, wodach powierzchniowych, glebie i osadach.
Rocznik
Strony
113--123
Opis fizyczny
Bibliogr. 50 poz., tab.
Twórcy
autor
  • Bialystok University of Technology, Faculty of Civil and Environmental Engineering, Division of Sanitary Biology and Biotechnology, ul. Wiejska 45 E, 15-351 Bialystok, Poland
  • Bialystok University of Technology, Faculty of Civil and Environmental Engineering, Division of Sanitary Biology and Biotechnology, ul. Wiejska 45 E, 15-351 Bialystok, Poland
Bibliografia
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  • [25] Matejczyk, M. & Rosochacki, S.J. (2006). Application of plasmid-borne green fluorescent protein-based bacterial biosensors for benzene and its selected derivatives detection in water ecosystems, Polish Journal of Environmental Studies, 15, 5D, 703–707.
  • [26] Matejczyk, M. & Rosochacki, S.J. (2007). Gfp gene as a fl uorescence tool for genes’ expression analysis and biosensors construction, Biotechnology, 1, 76, 53–62 (in Polish).
  • [27] Matejczyk, M. &. Zalewski, P. (2011). Endocrine disrupting compounds and its biological activity, Kosmos, 60, 1–2, 17–32 (in Polish),
  • [28] Ng, S.P., Palombo, E.A. & Bhave, M. (2012). Identification of a copper-responsive promoter and development of a copper biosensor in the soil bacterium, Achromobacter sp. AO22, World Journal of Microbiology and Biotechnology, 28, 5, 2221–8.
  • [29] Podgórska, B. & Węgrzyn, G.A. (2006). Modified Vibrio harveyi mutagenicity assay based on bioluminescence induction, Letters in Applied Microbiology, 42, 6, 578–582.
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  • [31] Reder-Christ, K. & Bendas, G. (2011). Biosensor applications in the fi eld of antibiotic research – a review of recent development, Sensors, 11, 9450–9466.
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  • [33] Robbens, J., Dardenne, F., Devriese, L., de Coen, W. & Blust, R. (2010). Escherichia coli as a bioreporter in ecotoxicology, Applied Microbiology and Biotechnology, 88, 5, 1007–25.
  • [34] Rosochacki S.J. & Matejczyk, M. (2002). Green fl uorescent protein as a molecular marker in microbiology, Acta microbiologica Polonica, 51, 205–216.
  • [35] Rybtke, M.T., Borlee, B.R., Murakami, K., Irie, Y., Nielsen, T.E., Givskov, M., Parsek, M.R. & Tolker- -Nielsen, T. (2012) A fl uorescence-based reporter of cyclic di-GMP levels in Pseudomonas aeruginosa, Applied and Environmental Microbiology, 11. PMID: 22582064.
  • [36] Shin, D., Moon, H.S., Lin, C.C., Barkay, T. & Nam, K. (2011). Use of reporter-gene based bacteria to quantify phenanthrene biodegradation and toxicity in soil, Environmental Pollution, 159, 2, 509–14.
  • [37] Shin, H.J. (2011). Genetically engineered microbial biosensors for in situ monitoring of environmental pollution, Applied Microbiology and Biotechnology, 89, 4, 867–77.
  • [38] Silva-Rocha, R., de Lorenzo, V. (2012). A GFP-lacZ bicistronic reporter system for promoter analysis in environmental gram-negative bacteria, PloS ONE, 7, 4, e34675. Doi: 10.1371/journal.pone.oo34675.
  • [39] Song, W., Pasco, N., Gooneratne, R. & Weld, R.J (2012). Comparison of three genetically modified Escherichia coli biosensor strains for amperometric tetracycline measurement, Biosensors and Bioelectronics, 15, 35, 1, 69–74.
  • [40] Struss, A.K., Pasini, P., Flomenhoft, D., Shashidhar, H. & Daunert, S. (2012). Investigating the effect of antibiotics on quorum sensing with whole-cell biosensing system, Analitycal and Bioanalitycal Chemistry, 402, 10, 3227–36.
  • [41] Svobodová, K. & Cajthaml, T. (2010). New in vitro reporter gene bioassays for screening of hormonal active compounds in the environment, Applied Microbiology and Biotechnology, 88, 839–847.
  • [42] Tecon, R., Binggeli, O. & van der Meer, J.R. (2009). Double-tagged fl uorescent bacterial bioreporter for the study of polycyclic aromatic hydrocarbon diffusion and bioavailability, Environmental Microbiology, 11, 9, 2271–83.
  • [43] Urban, A., Eckermann, S., Fast, B., Metzger, S., Gehling, M., Ziegelbauer, K., Rübsamen-Waigmann, H. & Freiberg, Ch. (2007). Novel whole-cell antibiotic biosensors for compound discovery, Applied and Environmental Microbiology,73, 20, 6436–6443.
  • [44] Wasterink, W.M.A., Stevenson, J.C.R., Lauwers, A., Griffi oen, G., Horbach, G.J. & Schoonen, W.G.E.J. (2009). Evaluation of the Vitotox™ and RadarScreen assays for the rapid assessment of genotoxicity in the early research phase of drug development, Mutation Research, 676, 113–130.
  • [45] Woutersen, M., Belkin, S., Brouwer, B., van Wezel, A.P. & Heringa, M.B. (2011). Are luminescent bacteria suitable for online detection and monitoring of toxic compounds in drinking water and its sources, Analitycal and Bioanalitycal Chemistry, 400, 915–929.
  • [46] Yagi, K. (2007). Applications of whole-cell bacterial sensors in biotechnology and environmental science, Applied Microbiology and Biotechnology, 73, 1251–1258.
  • [47] Yagur-Kroll, S., Bilic, B. & Belkin, S. (2010). Strategies for enhancing bioluminescent bacterial sensor performance by promoter region manipulation, Microbial Biotechnology, 3, 3, 300–10.
  • [48] Yu, Q., Li, Y., Ma, A., Liu, W., Wang, H. & Zhuang, G. (2011). An effi cient design strategy for a whole- -cell biosensor based on engineered ribosome binding sequences, Analitycal and Bioanalitycal Chemistry, 401, 9, 2891–8.
  • [49] Zhao, B., Baston, D.S., Khan, E., Sorrentino, C. & Denison, M.S. (2010). Enhancing the response of CALUX and CAFLUX cell bioassays for quantitative detection of dioxin-like compounds, Science China Chemistry, 53, 5, 1010–1016.
  • [50] Xu, T., Close, D.M., Sayler, G.S. & Ripp, S. (2013). Genetically modifi ed whole-cell bioreporters for environmental assessment, Ecological Indicators, 28, 125–141.
Typ dokumentu
Bibliografia
Identyfikator YADDA
bwmeta1.element.baztech-849e2c19-802f-499d-83c5-92815374494b
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