PL EN


Preferencje help
Widoczny [Schowaj] Abstrakt
Liczba wyników
Tytuł artykułu

Enhanced and Flexible Software Tools for X-ray Computed Tomography at the Italian Synchrotron Radiation Facility Elettra

Wybrane pełne teksty z tego czasopisma
Identyfikatory
Warianty tytułu
Języki publikacji
EN
Abstrakty
EN
X-ray computed tomography (CT) experiments performed at synchrotron radiation facilities require adequate computing and storage resources due to the large amount of acquired and reconstructed data produced. To satisfy the heterogeneous needs of beamline users, flexible solutions are also required. Moreover, the growing demand of quantitative image analysis impose an easy integration between the CT reconstruction process and the subsequent feature extraction step. This paper presents some of the software solutions adopted by the SYRMEP beamline of the Italian synchrotron radiation facility Elettra. By using the enhanced version of the reconstruction software here presented as well as data reduction and data analysis tools, beamline users can easily implement an integrated and comprehensive approach to the digital image processing and image analysis required by a tomography-oriented scientific workflow.
Wydawca
Rocznik
Strony
233--243
Opis fizyczny
Bibliogr. 16 poz., rys.
Twórcy
autor
  • Department of Engineering and Architecture University of Trieste Via A. Valerio, 10 - 34127 Trieste, Italy
autor
  • Department of Engineering and Architecture University of Trieste Via A. Valerio, 10 - 34127 Trieste, Italy
autor
  • Department of Engineering and Architecture University of Trieste Via A. Valerio, 10 - 34127 Trieste, Italy
  • Elettra - Sincrotrone Trieste S.C.p.A. Basovizza, Trieste, Italy
autor
  • Elettra - Sincrotrone Trieste S.C.p.A. Basovizza, Trieste, Italy
autor
  • Elettra - Sincrotrone Trieste S.C.p.A. Basovizza, Trieste, Italy
autor
  • Elettra - Sincrotrone Trieste S.C.p.A. Basovizza, Trieste, Italy
autor
  • Elettra - Sincrotrone Trieste S.C.p.A. Basovizza, Trieste, Italy
Bibliografia
  • [1] Bravin, A., Coan, P., Suortti, P.: X-ray phase-contrast imaging: from pre-clinical applications towards clinics, Physics in Medicine and Biology, 58(1), 2013, R1.
  • [2] Brun, F., Accardo, A., Kourousias, G., Dreossi, D., Pugliese, R.: Effective implementation of ring artifacts removal filters for synchrotron radiation microtomographic images, Proc. of the International Symposium on Image and Signal Processing and Analysis, ISPA, 2013, 672–676.
  • [3] Brun, F., Mancini, L., Kasae, P., Favretto, S., Dreossi, D., Tromba, G.: Pore3D: A software library for quantitative analysis of porous media, Nuclear Instruments and Methods in Physics Research, Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, 615(3), 2010, 326–332.
  • [4] De Carlo, F., Gürsoy, D., Marone, F., Rivers, M., Parkinson, D. Y., Khan, F., Schwarz, N., Vine, D. J., Vogt, S., Gleber, S.-C., Narayanan, S., Newville, M., Lanzirotti, T., Sun, Y., Hong, Y. P., Jacobsen, C.: Scientific data exchange: a schema for HDF5-based storage of raw and analyzed data, Journal of Synchrotron Radiation, 21(6), 2014, 1224–1230.
  • [5] Foster, I.: Designing and Building Parallel Programs: Concepts and Tools for Parallel Software Engineering, Addison-Wesley, 1995.
  • [6] Gürsoy, D., De Carlo, F., Xiao, X., Jacobsen, C.: TomoPy: a framework for the analysis of synchrotron tomographic data, Journal of Synchrotron Radiation, 21(5), 2014, 1188–1193.
  • [7] Kak, A., Slaney, M.: Principles of Computerized Tomographic Imaging, IEEE Press, 1988.
  • [8] Mayo, S., Gureyev, T., Nesterets, Y., Thompson, D., Siu, K., Wallwork, K.: A dedicated micro-CT beamline for the Australian synchrotron and the remote-CT project, Journal of Physics: Conference Series, 463(1), 2013, art. no. 012002.
  • [9] Miao, J., F¨orster, F., Levi, O.: Equally sloped tomography with oversampling reconstruction, Physical Review B - Condensed Matter and Materials Physics, 72(5), 2005, art. no. 052103.
  • [10] Mohammadi, S., Brun, F., Dullin, C., Dreossi, D., Tromba, G.: A comparison of free software implementations of phase retrieval algorithms for propagation-based X-ray microtomographic imaging, Proc. of the International Symposium on Image and Signal Processing and Analysis, ISPA, 2013, 615–619.
  • [11] Paganin, B.: Coherent X-ray Optics, Oxford University Press, 2013.
  • [12] Paganin, D., Mayo, S., Gureyev, T., Miller, P., Wilkins, S.: Simultaneous phase and amplitude extraction from a single defocused image of a homogeneous object, J. Micros., 206(1), 2002, 33–40.
  • [13] Palenstijn, W., Batenburg, K., Sijbers, J.: Performance improvements for iterative electron tomography reconstruction using graphics processing units (GPUs), Journal of Structural Biology, 176(2), 2011, 250–253.
  • [14] Pelt, D., Batenburg, K.: Improving filtered backprojection reconstruction by data-dependent filtering, IEEE Transactions on Image Processing, 23(11), 2014, 4750–4762.
  • [15] Rivers, M. L.: tomoRecon: High-speed tomography reconstruction on workstations using multi-threading, Proceedings of SPIE, 8506, 2012, 85060U–85060U–13.
  • [16] Tromba, G., Longo, R., Abrami, A., Arfelli, F., Astolfo, A., Bregant, P., Brun, F., Casarin, K., Chenda, V., Dreossi, D., Hola, M., Kaiser, J., Mancini, L., Menk, R., Quai, E., Quaia, E., Rigon, L., Rokvic, T., Sodini, N., Sanabor, D., Schultke, E., Tonutti, M., Vascotto, A., Zanconati, F., Cova, M., Castelli, E.: The SYRMEP beamline of Elettra: Clinical mammography and bio-medical applications, AIP Conference Proceedings, 1266, 2010, 18–23.
Typ dokumentu
Bibliografia
Identyfikator YADDA
bwmeta1.element.baztech-77d6ffe5-1452-40f6-b35a-4a084cf2445f
JavaScript jest wyłączony w Twojej przeglądarce internetowej. Włącz go, a następnie odśwież stronę, aby móc w pełni z niej korzystać.