Adsorbenty ze związanymi cieczami jonowymi i ich wykorzystanie w przygotowaniu próbek oligonukleotydów

• Autorzy: Nuckowski Łukasz , Zalesińska Ewa , Studzińska Sylwia

Warianty tytułu

EN

Adsorbents with bonded ionic liquids and their use in the preparation of oligonucleotides samples

• Języki publikacji: PL

Abstrakty

EN

Oligonucleotides are short fragments of nucleic acids. They have a growing potential in medicine, especially as diagnostic and therapeutic agents. In most cases, these compounds are determined in the complex biological matrix. Thus, the sample preparation step is very important in their bioanalysis. Solid-phase extraction is a predominant technique in this field. However, presently used for this purpose adsorbents have disadvantages. They ensure low extraction effectiveness and procedures using them are labor-intensive or time-consuming. Ionic liquids, since their discovery, are objects of intensive interest of scientists. Their scientific attractiveness is connected with their unique properties. They are used in separation and sample preparation techniques, such as liquid-liquid extraction using water-immiscible ionic liquids. This approach was also used in the extraction of oligonucleotides. Adsorbents modified with ionic-liquids have growing potential in extraction techniques. Few types of materials are used, namely carbon, polymers, and silica. A common feature of these materials modified with ionic liquids is the ion exchange character. Nonetheless, carbon nanomaterials are coated or covalently modified with ionic liquids, and they are used mainly for nonpolar compounds. Polymer and silica-based adsorbents are used mainly for acidic compounds. Polymers are characterized by the highest stability of the presented materials. Due to their ion-exchange properties crosslinked poly(ionic liquids) were used also for extraction of unmodified and modified oligonucleotides. The optimized procedure applying the material with bonded zwitterion ionic liquid gives high recoveries. It is concurrent for presently used adsorbents, thus solves problems connected with their usage. Moreover, it can be used for biological samples without any pre-purification.

Słowa kluczowe

PL

przygotowanie próbek; oligonukleotydy; ciecze jonowe; adsorbenty

EN

sample preparation; oligonucleotides; ionic liquids; adsorbents

• Wydawca: Polskie Towarzystwo Chemiczne
• Czasopismo: Wiadomości Chemiczne
• Rocznik: 2020
• Tom: [Z] 74, 7-8
• Strony: 545--565
• Opis fizyczny: Bibliogr. 71 poz., schem.

Twórcy

autor

Nuckowski Łukasz

• Katedra Chemii Środowiska i Bioanalityki, Wydział Chemii Uniwersytet Mikołaja Kopernika w Toruniu ul. Gagarina 7, 87-100 Toruń

autor

Zalesińska Ewa

• Katedra Chemii Środowiska i Bioanalityki, Wydział Chemii Uniwersytet Mikołaja Kopernika w Toruniu ul. Gagarina 7, 87-100 Toruń

autor

Studzińska Sylwia

• Katedra Chemii Środowiska i Bioanalityki, Wydział Chemii Uniwersytet Mikołaja Kopernika w Toruniu ul. Gagarina 7, 87-100 Toruń

Bibliografia

• [1] J. Wang, J. Chen, S. Sen, J. Cell. Physiol., 2016, 231, 25.
• [2] C.A. Stein, D. Castanotto, Mol. Ther., 2017, 25, 1069.
• [3] A.C. McGinnis, B. Chen, M.G. Bartlett, J. Chromatogr. B, 2012, 883-884, 76.
• [4] Ł. Nuckowski, A. Kaczmarkiewicz, S. Studzińska, J. Chromatogr. B, 2018, 1090, 90.
• [5] D.R. MacFarlane, M. Kar, J.M. Pringle, Fundamentals of Ionic Liquids, Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim, Germany, 2017.
• [6] J. Liu, G. Jiang, J. Liu, J.Á. Jönsson, TrAC Trends Anal. Chem., 2005, 24, 20.
• [7] N. Fontanals, F. Borrull, R.M. Marce, TrAC Trends Anal. Chem., 2012, 41, 15.
• [8] V.W. Rodwell, D.A. Bender, K.M. Botham, P.J. Kennelly, P.A. Weil, Biochemia Harpera Ilustrowana, PZWL Wydawnictwo Lekarskie, Warszawa, 2018.
• [9] Z.J. Lin, W. Li, G. Dai, J. Pharm. Biomed. Anal., 2007, 44, 330.
• [10] E. Urban, C.R. Noe, Farmaco., 2003, 58, 243.
• [11] J. Goodchild (edytor), Methods in Molecular Biology (Methods and Protocols), Humana Press, New York, 2011.
• [12] B.S. Sproat, J. Biotechnol., 1995, 41, 221.
• [13] V. Arora, D.C. Knapp, M.T. Reddy, D.D. Weller, P.L. Iversen, J. Pharm. Sci., 2002, 91, 1009.
• [14] G.R. Devi, T.M. Beer, C.L. Corless, V. Arora, D.L. Weller, P.L. Iversen, Clin. Cancer Res., 2005, 11, 3930.
• [15] S. Studzińska, R. Rola, В. Buszewski, Anal. Bioanal. Chem., 2016, 408, 1585.
• [16] Q. Tian, J. Rogness, M. Meng, Z. Li, Bioanalysis, 2017, 9, 861.
• [17] A.C. McGinnis, B.S. Cummings, M.G. Bartlett, Anal. Chim. Acta, 2013, 799, 57.
• [18] B. Chen, M.G. Bartlett, J. Chromatogr. A, 2013, 1288, 73.
• [19] P. Turnpenny, J. Rawal, T. Schardt, S. Lamoratta, H. Mueller, M. Weber, K. Brady, Bioanalysis, 2011, 3, 1911.
• [20] Ł. Nuckowski, A. Kaczmarkiewicz, S. Studzińska, Bioanalysis, 2018, 10, 1667.
• [21] Ł. Nuckowski, A. Kaczmarkiewicz, S. Studzińska, В. Buszewski, Analyst, 2019, 144, 4622.
• [22] W. Zhang, N. Leighl, D. Zawisza, M.J. Moore, E.X. Chen, J. Chromatogr. B, 2005, 829, 45.
• [23] R.Z. Yu, R.S. Geary, D.K. Monteith, J. Matson, L. Truong, J. Fitchett, A.A. Levin, J. Pharm. Sci., 2004, 93, 48.
• [24] G. Zhang, J. Lin, K. Srinivasan, O. Kavetskaia, J.N. Duncan, Anal. Chem., 2007, 79, 3416.
• [25] Y. Cen, X. Li, D. Liu, F. Pan, Y. Cai, B. Li, W. Peng, C. Wu, W. Jiang, H. Zhou, J. Pharm. Biomed. Anal., 2012, 70, 447.
• [26] B. Chen, M. Bartlett, AAPS J., 2012, 14, 772.
• [27] J. Li, J. Liu, J. Enders, M. Arciprete, C. Tran, K. Aluri, L.-H. Guan, J. O’Shea, A. Bisbe, K. Charissé, I. Zlatev, D. Najarían, Y. Xu, Bioanalysis, 2019, 11, 1955.
• [28] J. Liu, J. Li, C. Tran, K. Aluri, X. Zhang, V. Clausen, I. Zlatev, L. Guan, S. Chong, K. Charisse, J.T. Wu, D. Najarian, Y. Xu, Bioanalysis, 2019, 11, 1967.
• [29] M. Hemsley, M. Ewles, G. Lee, Bioanalysis, 2012, 4, 1457.
• [30] K.N. Marsh, A. Deev, A.C.-T. Wu, E. Tran, A. Klamt, Korean J. Chem. Eng., 2002, 19, 357.
• [31] K. Marsh, J. Boxall, R. Lichtenthaler, Fluid Phase Equilib., 2004, 219, 93.
• [32] S. Zhang, N. Sun, X. He, X. Lu, X. Zhang, J. Phys. Chem. Ref. Data., 2006, 35, 1475.
• [33] H. Olivier-Bourbigou, L. Magna, D. Morvan, Appl. Catal. A Gen., 2010, 373, 1.
• [34] A. Berthod, S. Carda-Broch, Anal. Bioanal. Chem., 2004, 380, 168.
• [35] C. Maton, N. De Vos, C. V. Stevens, Chem. Soc. Rev., 2013, 42, 5963.
• [36] B. Buszewski, S. Studzińska, Chromatographia, 2008, 68, 1.
• [37] Y. Huang, S. Yao, H. Song, J. Chromatogr. Sci., 2013, 51, 739.
• [38] J.H. Wang, D.H. Cheng, X.W. Chen, Z. Du, Z.L. Fang, Anal. Chem., 2007, 79, 620.
• [39] K.D. Clark, O. Nacham, H. Yu, T. Li, M.M. Yamsek, D.R. Ronning, J.L. Anderson, Anal. Chem., 2015, 87, 1552.
• [40] L. Vidal, M.L. Riekkola, A. Canals, Anal. Chim. Acta., 2012, 715, 19.
• [41] Ş. Tokalioglu, E. Yavuz, H. Şahan, S.G. Çolak, K. Ocakoğlu, M. Kaçer, Ş. Patat, Talanta, 2016, 159, 222.
• [42] T. Chatzimitakos, C. Stalikas, Separations, 2017, 4, 14.
• [43] X. Cao, L. Shen, X. Ye, F. Zhang, J. Chen, W. Mo, Analyst, 2014, 139, 1938.
• [44] M.-Q. Cai, J. Su, J.-Q. Hu, Q. Wang, C.-Y. Dong, S.-D. Pan, M.-C. Jin, J. Chromatogr. A, 2016, 1459, 38.
• [45] M. Sun, Y. Bu, J. Feng, C. Luo, J. Sep. Sci., 2016, 39, 375.
• [46] X. Zhou, Y. Zhang, Z. Huang, D. Lu, A. Zhu, G. Shi, Sci. Rep., 2016, 6, 38417.
• [47] X. Xu, M. Zhang, L. Wang, S. Zhang, M. Liu, N. Long, X. Qi, Z. Cui, L. Zhang, Food Anal. Methods, 2016, 9, 1696.
• [48] D. Xiao, D. Yuan, H. He, C. Pham-Huy, H. Dai, C. Wang, C. Zhang, Carbon, 2014, 72, 274.
• [49] H. Chen, Y. Yuan, C. Xiang, H. Yan, Y. Han, F. Qiao, J. Chromatogr. A, 2016, 1474, 23.
• [50] M. Luo, D. Liu, L. Zhao, J. Han, Y. Liang, P. Wang, Z. Zhou, Anal. Chim. Acta., 2014, 852, 88.
• [51] M. Serrano, T. Chatzimitakos, M. Gallego, C.D. Stalikas, J. Chromatogr. A, 2016, 1436, 9.
• [52] M. Pei, Z. Zhang, X. Huang, Y. Wu, Talanta, 2017, 165, 152.
• [53] N. Fontanals, S. Ronka, F. Borrull, A.W. Trochimczuk, R.M. Mareé, Talanta, 2009, 80, 250.
• [54] X. Huang, L. Chen, D. Yuan, S. Bi, J. Chromatogr. A, 2012, 1248, 67.
• [55] L. Chen, X. Huang, Y. Zhang, D. Yuan, J. Chromatogr. A, 2015, 1403, 37.
• [56] R. Nayebi, G. Daneshvar Tarigh, F. Shemirani, Sci. Rep., 2019, 9, 11130.
• [57] M. Tian, H. Yan, K.H. Row, Anal. Lett., 2009, 43, 110.
• [58] W. Bi, M. Tian, K.H. Row, Phytochem. Anal., 2010, 21, 496.
• [59] F. Zhao, Y. Meng, J.L. Anderson, J. Chromatogr. A, 2008, 1208, 1.
• [60] M. Tian, W. Bi, K.H. Row, J. Sep. Sci., 2009, 32, 4033.
• [61] P. Żuvela, M. Skoczylas, J. Jay Liu, T. Baczek, R. Kaliszan, M.W. Wong, B. Buszewski, Chem. Rev., 2019, 119, 3674.
• [62] B. Buszewski, M. Jezierska, M. Wełniak, D. Berek, J. High Resolut. Chromatogr., 1998, 21, 267.
• [63] G. Fang, J. Chen, J. Wang, J. He, S. Wang, J. Chromatogr. A, 2010, 1217, 1567.
• [64] W. Bi, J. Zhou, K.H. Row, Talanta, 2011, 83, 974.
• [65] M. Tian, H. Yan, K.H. Row, J. Chromatogr. B, 2009, 877, 738.
• [66] M. Tian, K.H. Row, Chromatographia, 2011, 73, 25.
• [67] H. Zhang, K.H. Row, J. Carbohydr. Chem., 2014, 33, 225.
• [68] H.M. Marwani, E.M. Bakhsh, Am. J. Anal. Chem., 2013, 4, 8.
• [69] L. Vidal, J. Parshintsev, K. Hartonen, A. Canals, M.-L. Riekkola, J. Chromatogr. A, 2012, 1226, 2.
• [70] M. Li, P.J. Pham, T. Wang, C.U. Pittman, T. Li, Bioresour. Technol., 2009, 100, 6385.
• [71] Ł. Nuckowski, E. Zalesińska, K. Dzieszkowski, Z. Rafiński, S. Studzińska, Talanta, in press.

Uwagi

Opracowanie rekordu ze środków MNiSW, umowa Nr 461252 w ramach programu "Społeczna odpowiedzialność nauki" - moduł: Popularyzacja nauki i promocja sportu (2020).