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Identification and Screening of Biofilm-Forming Bacteria Isolated from Mangrove Sediment for Plastic Degradation

Treść / Zawartość
Identyfikatory
Warianty tytułu
Języki publikacji
EN
Abstrakty
EN
Plastic waste is particularly harmful to human life and the environment since it is difficult to degrade. This plastic waste contributes to seawater pollution, which can disrupt the food chain and harm biodiversity in the environment, particularly the mangrove ecosystem. Mangroves act as a sediment barrier and help to decrease coastal abrasion. In the natural environment, indigenous bacteria are crucial to the bioremediation of environmental pollution, including plastic waste pollution. Bioremediation is considered environmentally friendly and can accelerate the degradation time of waste containing toxic compounds. Biofilm-forming bacteria also play an important role in the biodegradation of plastics. This research was conducted to isolate bacteria from mangrove sediment and characterize their potential as a candidate to degrade polyethylene plastic. We have found that 25 of 53 PEG-degrading bacteria could form biofilms on plastic surfaces. Seven bacterial isolates showed the ability to produce clear zones during the degradation of PEG and biofilm formation. The seven potential bacterial isolates identified using 16s rRNA gene as Bacillus sporotermodurans, Cytobacillus firmus, Rossellomorea vietnamensis, Stutzerimonas stutzeri, Dyadobacter jejuensis, Rhodococcus sp., and Achromobacter sp.
Słowa kluczowe
Rocznik
Strony
357--366
Opis fizyczny
Bibliogr. 36 poz., rys., tab.
Twórcy
  • Research Center for Oceanography, National Research and Innovation Agency, Jakarta, Indonesia
  • Faculty of Agricultural Technology, Department of Food Science and Biotechnology, University of Brawijaya, Malang, Indonesia
  • Research Center for Oceanography, National Research and Innovation Agency, Jakarta, Indonesia
  • Research Center for Oceanography, National Research and Innovation Agency, Jakarta, Indonesia
autor
  • Research Center for Oceanography, National Research and Innovation Agency, Jakarta, Indonesia
  • Research Center for Oceanography, National Research and Innovation Agency, Jakarta, Indonesia
Bibliografia
  • 1. Afianti, N.F., Febrian, D., Falahudin, D. 2019. Isolasi bakteri pendegradasi minyak mentah dan polisiklik aromatik hidrokarbon dari sedimen mangrove Bintan. Oseanologi Dan Limnologi Di Indonesia, 4(3), 155. https://doi.org/10.14203/oldi.2019.v4i3.260
  • 2. Afianti, N.F., Rachman, A., Hatmanti, A., Yogaswara, D., Anggiani, M., Fitriya, N., Darmayati, Y. 2022. Microbial biofilm of plastic in tropical marine environment and their potential for bioremediation of plastic waste. Journal of Ecological Engineering, 23(4), 261–275. https://doi.org/10.12911/22998993/145463
  • 3. Al Hamra, A.J., Patria, M.P. 2019. Microplastic in Gonggong snails (Laevistrombus turturella) and sediment of Bintan Island, Kepulauan Riau Province, Indonesia. AIP Conference Proceedings, 020079. https://doi.org/10.1063/1.5141692
  • 4. Ali, S., Rehman, A., Hussain, S.Z., Bukhari, D.A. 2023. Characterization of plastic degrading bacteria isolated from sewage wastewater. Saudi Journal of Biological Sciences, 30(5), 103628. https://doi. org/10.1016/J.SJBS.2023.103628
  • 5. Ambeng, Zubair, H., Oka, N.P., Tonggiroh, A. 2019. Isolation and characterization of bacteria from mangrove sediment at coastal area in Pangkep South Sulawesi. Journal of Physics: Conference Series, 1341(2). https://doi. org/10.1088/1742-6596/1341/2/022016
  • 6. Auta, H.S., Emenike, C.U., Jayanthi, B., Fauziah, S.H. 2018. Growth kinetics and biodeterioration of polypropylene microplastics by Bacillus sp. and Rhodococcus sp. isolated from mangrove sediment. Marine Pollution Bulletin, 127, 15–21. https://doi.org/10.1016/J.MARPOLBUL.2017.11.036
  • 7. Dutta, S., Kang, J.A., Khanh, N. Van, Choi, S.Y., Lee, Y.H. 2023. Complete genome sequence of Cytobacillus firmus JBRS159, a biocontrol agent against bacterial panicle blight of rice plants. Korean Journal of Microbiology, 59(1), 55–57. https://doi.org/10.7845/KJM.2023.3017
  • 8. El-Kurdi, N., El-Shatoury, S., ElBaghdady, K., Hammad, S., Ghazy, M. 2024. Biodegradation of polystyrene nanoplastics by Achromobacter xylosoxidans M9 offers a mealworm gut-derived solution for plastic pollution. Archives of Microbiology, 206(5). https://doi.org/10.1007/S00203-024-03947-Z
  • 9. Guo, W., Duan, J., Shi, Z., Yu, X., Shao, Z. 2023. Biodegradation of PET by the membrane-anchored PET esterase from the marine bacterium Rhodococcus pyridinivorans P23. Communications Biology 2023 6:1, 6(1), 1–13. https://doi.org/10.1038/s42003-023-05470-1
  • 10. Haritash, A.K., Kaushik, C.P. 2009. Biodegradation aspects of polycyclic aromatic hydrocarbons (PAHs): A review. Journal of Hazardous Materials, 169(1–3), 1–15. https://doi.org/10.1016/j.jhazmat.2009.03.137
  • 11. Hidayati, J.R., Apdillah, D., Idris, F., Anugrah, S., Hamza, S., Sihite, D., Syafitri, M., Febrianto, T., Syakti, A.D. 2023. Size and types distribution of marine debris in the mangrove ecosystem of Bintan Island - Indonesia. 144–155. https://doi.org/10.2991/978-94-6463-140-1_15
  • 12. Howard, S.A., Carr, C.M., Sbahtu, H.I., Onwukwe, U., López, M.J., Dobson, A.D.W., McCarthy, R.R. 2023. Enrichment of native plastic-associated biofilm communities to enhance polyester degrading activity. Environmental Microbiology, 25(12), 2698–2718. https://doi.org/10.1111/1462-2920.16466
  • 13. Idris, F., Febrianto, T., Hidayati, J.R., Rajib, Nugraha, A.H. 2022. Microplastic abundance in sea cucumber at seagrass ecosystem of Bintan Island and surrounding area, Indonesia. IOP Conference Series: Earth and Environmental Science, 967(1), 012009. https://doi.org/10.1088/1755-1315/967/1/012009
  • 14. Ingavale, R.R., Raut, P.D. 2018. Comparative Biodegradation Studies of LDPE and HDPE Using Bacillus weihenstephanensis Isolated from Garbage Soil. Nature Environment and Pollution Technology, 17(2), 649–655. www.neptjournal.com
  • 15. Jambeck, J.R., Geyer, R., Wilcox, C., Siegler, T.R., Perryman, M., Andrady, A., Narayan, R., Law, K. L. 2015. Plastic waste inputs from land into the ocean. Science, 347(6223), 768–771. https://doi.org/10.1126/SCIENCE.1260352/SUPPL_FILE/ JAMBECK.SM.PDF
  • 16. Joshi, G., Goswami, P., Verma, P., Prakash, G., Simon, P., Vinithkumar, N.V., Dharani, G. 2022. Unraveling the plastic degradation potentials of the plastisphere-associated marine bacterial consortium as a key player for the low-density polyethylene degradation. Journal of Hazardous Materials, 425, 128005. https://doi.org/10.1016/J.JHAZMAT.2021.128005
  • 17. Karniati, R., Sulistiyono, N., Amelia, R., Slamet, B., Bimantara, Y., Basyuni, M. 2021. Mangrove ecosystem in North Sumatran (Indonesia) forests serves as a suitable habitat for mud crabs (Scylla serrata and S. olivacea). Biodiversitas Journal of Biological Diversity, 22(3), 1489–1496. https://doi.org/10.13057/BIODIV/D220353
  • 18. Kavitha, S., Raghavan, V. 2018. Isolation and characterization of marine biofilm forming bacteria from a ship’s hull. Frontiers in Biology, 13(3), 208–214. https://doi.org/10.1007/S11515-018-1496-0/METRICS
  • 19. Kowalczyk, A., Chyc, M., Ryszka, P., Latowski, D. 2016. Achromobacter xylosoxidans as a new microorganism strain colonizing high-density polyethylene as a key step to its biodegradation. Environmental Science and Pollution Research International, 23(11), 11349–11356. https://doi.org/10.1007/S11356-016-6563-Y
  • 20. Liu, P., Zhang, T., Zheng, Y., Li, Q., Liang, Q., Qi, Q. 2022. Screening and genome analysis of a Pseudomonas stutzeri that degrades PET monomer terephthalate. Acta Microbiologica Sinica, 62(1), 200–212. https://doi.org/10.13343/J.CNKI. WSXB.20210178
  • 21. Marquez, J.R. 2018. Degradability of plastics in mangrove soil from eco-mangrove reserve in Calapan City, Oriental Mindoro Philippines. JPAIR Multidisciplinary Research, 31(1), 76–92. https://doi.org/10.7719/jpair.v31i1.565
  • 22. Nademo, Z.M., Shibeshi, N.T., Gemeda, M.T. 2023. Isolation and screening of low-density polyethylene (LDPE) bags degrading bacteria from Addis Ababa municipal solid waste disposal site Koshe. Annals of Microbiology, 73(1), 1–11. https://doi.org/10.1186/S13213-023-01711-0/figures/6
  • 23. Novitasari, A., Satyantini, W., Andriyono, S., Noor, S. 2023. Isolasi dan identifikasi bakteri pengurai mikroplastik polyethylene terephthalate dari sedimen ekosistem mangrove pasir putih. Journal of Marine Research, 12(1), 52–60. https://doi.org/10.14710/JMR.V12I1.37503
  • 24. Ogonowski, M., Motiei, A., Ininbergs, K., Hell, E., Gerdes, Z., Udekwu, K.I., Bacsik, Z., Gorokhova, E. 2018. Evidence for selective bacterial community structuring on microplastics. Environmental Microbiology, 20(8), 2796–2808. https://doi.org/10.1111/1462-2920.14120
  • 25. O’Toole, G.A. 2011. Microtiter dish biofilm formation assay. Journal of Visualized Experiments: JoVE, 47. https://doi.org/10.3791/2437
  • 26. Pinto, M., Langer, T.M., Hüffer, T., Hofmann, T., Herndl, G.J. 2019. The composition of bacterial communities associated with plastic biofilms differs between different polymers and stages of biofilm succession. PLoS ONE, 14(6). https://doi.org/10.1371/JOURNAL.PONE.0217165
  • 27. Rong, Z., Ding, Z.H., Wu, Y.H., Xu, X.W. 2024. Degradation of low-density polyethylene by the bacterium Rhodococcus sp. C-2 isolated from seawater. Science of The Total Environment, 907, 167993. https://doi.org/10.1016/J.SCITOTENV.2023.167993
  • 28. Sekiguchi, T., Saika, A., Nomura, K., Watanabe, T., Watanabe, T., Fujimoto, Y., Enoki, M., Sato, T., Kato, C., Kanehiro, H. 2011. Biodegradation of aliphatic polyesters soaked in deep seawaters and isolation of poly(ɛ-caprolactone)-degrading bacteria. Polymer Degradation and Stability, 96(7), 1397–1403. https://doi.org/10.1016/J.POLYMDEGRADSTAB.2011.03.004
  • 29. Skariyachan, S., Megha, M., Kini, M.N., Mukund, K.M., Rizvi, A., Vasist, K. 2015. Selection and screening of microbial consortia for efficient and ecofriendly degradation of plastic garbage collected from urban and rural areas of Bangalore, India. Environmental Monitoring and Assessment, 187(1). https://doi.org/10.1007/S10661-014-4174-Y
  • 30. Sooriyakumar, P., Bolan, N., Kumar, M., Singh, L., Yu, Y., Li, Y., Weralupitiya, C., Vithanage, M., Ramanayaka, S., Sarkar, B., Wang, F., Gleeson, D.B., Zhang, D., Kirkham, M.B., Rinklebe, J., M Siddique, K. H. 2022. Biofilm formation and its implications on the properties and fate of microplastics in aquatic environments: A review. Journal of Hazardous Materials Advances, 6, 100077. https://doi.org/10.1016/J.HAZADV.2022.100077
  • 31. Syakti, A.D., Hidayati, N.V., Jaya, Y.V., Siregar, S.H., Yude, R., Suhendy, Asia, L., Wong-WahChung, P., Doumenq, P. 2018. Simultaneous grading of microplastic size sampling in the Small Islands of Bintan water, Indonesia. Marine Pollution Bulletin, 137, 593–600. https://doi.org/10.1016/J.MARPOLBUL.2018.11.005
  • 32. Syakti, A.D., Jacob, M., Birrien, T., Suhana, M.P., Aziz, M.Y., Salim, A., Doumenq, P., Louarn, G. 2019. Daily apportionment of stranded plastic debris in the Bintan Coastal area, Indonesia. Marine Pollution Bulletin, 149, 110609. https://doi.org/10.1016/J.MARPOLBUL.2019.110609
  • 33. Tao, X., Ouyang, H., Zhou, A., Wang, D., Matlock, H., Morgan, J.S., Ren, A.T., Mu, D., Pan, C., Zhu, X., Han, A., Zhou, J. 2023. Polyethylene degradation by a rhodococcous strain isolated from naturally weathered plastic waste enrichment. Environmental Science and Technology, 57(37), 13901–13911. https://doi.org/10.1021/ACS.EST.3C03778/ASSET/IMAGES/LARGE/ES3C03778_0006.JPEG
  • 34. Thakur, P., Kumar, S. 2023. Exploring bioleaching potential of indigenous Bacillus sporothermodurans ISO1 for metals recovery from PCBs through sequential leaching process. 41(7), 1255–1266. https://doi.org/10.1177/0734242X231155102
  • 35. Zampolli, J., Vezzini, D., Brocca, S., Di Gennaro, P. 2023. Insights into the biodegradation of polycaprolactone through genomic analysis of two plastic-degrading Rhodococcus bacteria. Frontiers in Microbiology, 14, 1284956. https://doi.org/10.3389/FMICB.2023.1284956/BIBTEX
  • 36. Zeenat, Elahi, A., Bukhari, D.A., Shamim, S., Rehman, A. 2021. Plastics degradation by microbes: A sustainable approach. Journal of King Saud University - Science, 33(6), 101538. https://doi.org/10.1016/J.JKSUS.2021.101538
Typ dokumentu
Bibliografia
Identyfikator YADDA
bwmeta1.element.baztech-424c7320-ed8d-4685-8aa6-981aa2ba00b5
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