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A brief overview of the applicability of FISH methods in environmental engineering

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Warianty tytułu
PL
Krótki przegląd zastosowań metod FISH w inżynierii środowiska
Języki publikacji
EN PL
Abstrakty
EN
Fluorescent in situ hybridization (FISH) is a commonly used method for the detection of microorganisms in heterogeneous environment. It is primarily used for quantitative analysis of microorganisms. FISH gives possibilities of evaluating activities of some bacteria and their physiological state in the environment. In the recent years, ftuorescent in situ hybridization has been improved and adapted for the research on environmental samples.
Rocznik
Strony
42--45
Opis fizyczny
Bibliogr. 18 poz.,
Twórcy
autor
  • Kielce University of Technology
  • Kielce University of Technology
autor
  • Kielce University of Technology
Bibliografia
  • [1] Alba E. Vegaa, Teresa Alarcónb, Diego Domingob, Manuel López-Brea.: Detection of clarithromycin-resistant Helicobacter pylori in frozen gastric biopsies from pediatric patients by a commercially available fluorescent in situ hybridization. Diagnostic Microbiology and Infectious Disease 59, 2007.
  • [2] Smyłka A.: Zagrożenia bakteryjne wód powierzchniowych. Zakład Mikrobiologii i Biotechnologii Akademia Jana Długosza Częstochowa.
  • [3] Amann R.I., Binder B.J., Olson R.J., Chisholm S.W., Devereux R., Stahl D.A.: Combination of ICS rPNA-Targeted Oligonucleotide Probes with Flow Cytometry for Analyzing Mixed Microbial Populations, Appl. Environ. Microbiol., 1990.
  • [4] Aoi Y.: In Situ Identyfication of Miceroorganisms in Biofilm Communities, J. Biosci. Bio eng., 2000.
  • [5] Behnam E., Vilcinskas A., Wagner M., Stoecker K.: Straightforward DOPE-FISH Method for Simultaneous Multicolor Detection of Six Microbial Populations, Appl. Environ. Microbiol., 2012.
  • [6] Carl Zeiss Microscopy GmbH, Operating manual LSM 700. May 2012.
  • [7] Delatolla R., Tufenkji N., Comeau Y., Lamarre D., Gadbois A., Berk D.: In situ characterization of nitrifying biofilm: Minimizing biomass loss and preserving perspective, Wat. Res., 2009.
  • [8] Jeffrey M. Levsky And Robert H. Singer.: Fluorescence in situ hybridization: past, present and future. Journal of Cell Science 116, 2003.
  • [9] ZWIRGLMAJER KATRIN.: Fluorescence in situ hybridisation [FISH] - the next generation. FEMS Microbiology Letters 246, 2005.
  • [10] Larsson S., Mezule L., Juhna T.: applicability of biofilm sampling for detection of pathogens in drinking water distribution networks. Data from coupons and concentration methods. TECHNEAU, D.3.8.3, March 2009.
  • [11] Michael Neumann, Detlef Gabel: Simple Method for Reduction of Autofluorescence in Fluorescence Microscopy., J Histochem Cytochem 2002.
  • [12] Moralli D., Monaco Z.L. Simultaneous Detection of FISH Signals and Bromo-Deoxyuridine Incorporation in Fixed Tissue Cultured Cells. PLoS ONE, 2009.
  • [13] Pinkel D.: Fluorescence in situ Hybridization with Human Chromosome-Specific Libraries: Detection of Trisomy 21 and Translocations of Chromosome 4. Proceedings of the National Academy of Sciences. 1988.
  • [14] Poppert, Sven, Riecker, Melanie, Essig Andreas. Rapid identification of Propionibacterium acnes from blood cultures by fluorescence in situ hybridization. Diagnostic Microbiology and Infectious Disease 66, 2010.
  • [15] Rudolf Amaim, Bernhard M Fuchs, Sebastian Behrens.: The identification of microorganisms by fluorescence in situ Hybridisation. Current Opinion in Biotechnology 2001.
  • [16] Stefano Fazi, Stefano Amalritano, Ilaria Pizzetti, Jakob Pernthaler.: Efficiency of fluorescence in situ hybridization for bacterial cell identification in temporary river sediments with contrasting water content. Systematic and Applied Microbiology 30, 2007.
  • [17] Traczewska T.M., Sitarska M.: Development of biofilm on synthetic polymers used in water distribution. Environ. Prot. Eng., 2009.
  • [18] Wagner M., Haider S.: New trends in fluorescence in situ hybridization for identification and functional analyses of microbes. Curr. Opin. Biotechnol., 2012.
Typ dokumentu
Bibliografia
Identyfikator YADDA
bwmeta1.element.baztech-40f7d706-aef0-4d1a-9115-7534b44735c1
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