PL EN


Preferencje help
Widoczny [Schowaj] Abstrakt
Liczba wyników
Czasopismo
2014 | 12 | 8 | 603-609
Tytuł artykułu

Localized mRNA translation and protein association

Treść / Zawartość
Warianty tytułu
Języki publikacji
EN
Abstrakty
EN
Recent direct observations of localization of mRNAs and proteins both in prokaryotic and eukaryotic cells can be related to slowdown of diffusion of these species due to macromolecular crowding and their ability to aggregate and form immobile or slowly mobile complexes. Here, a generic kinetic model describing both these factors is presented and comprehensively analyzed. Although the model is non-linear, an accurate self-consistent analytical solution of the corresponding reaction-diffusion equation has been constructed, the types of localized protein distributions have been explicitly shown, and the predicted kinetic regimes of gene expression have been classified.
Wydawca
Czasopismo
Rocznik
Tom
12
Numer
8
Strony
603-609
Opis fizyczny
Daty
wydano
2014-08-01
online
2014-07-20
Bibliografia
  • [1] J. Rausenberger, C. Fleck, J. Timmer, M. Kollmann, Progr. Biophys. Molec. Biol. 100, 57 (2009) http://dx.doi.org/10.1016/j.pbiomolbio.2009.06.003[Crossref]
  • [2] O. Purcell, N.J. Savery, C.S. Grierson, M. di Bernardo, J. Roy. Soc. Interface 7, 1503 (2010) http://dx.doi.org/10.1098/rsif.2010.0183[Crossref]
  • [3] V.P. Zhdanov, Phys. Rep. 500, 1 (2011) http://dx.doi.org/10.1016/j.physrep.2010.12.002[Crossref]
  • [4] D.F.T. Veiga, B. Dutta, G. Balazsi, Molec. Biosyst. 6, 469 (2010) http://dx.doi.org/10.1039/b916989j[Crossref]
  • [5] M. Valencia-Burtona et al., Proc. Natl. Acad. Sci. USA 106, 16399 (2009) http://dx.doi.org/10.1073/pnas.0907495106[Crossref]
  • [6] J.H. Russell, K.C. Keiler, Proc. Natl. Acad. Sci. USA 106, 16405 (2009) http://dx.doi.org/10.1073/pnas.0904904106[Crossref]
  • [7] P. Montero Llopis, A.F. Jackson, O. Sliusarenko, I. Surovtsev, J. Heinritz, T Emonet, C. Jacobs-Wagner, Nature 466, 77 (2010) http://dx.doi.org/10.1038/nature09152[Crossref]
  • [8] K. Nevo-Dinur, A. Nussbaum-Shochat, S. Ben-Yehuda, O. Amster-Choder, Science 331, 1081 (2011) http://dx.doi.org/10.1126/science.1195691[Crossref]
  • [9] T.E. Kuhlman, E.C. Cox, Molec. Syst. Biol. 8, 610 (2012). http://dx.doi.org/10.1038/msb.2012.42[Crossref]
  • [10] G. Laloux, C. Jacobs-Wagner, J. Cell Biol. 201, 827 (2013) http://dx.doi.org/10.1083/jcb.201303036[Crossref]
  • [11] N.E. Broude, Molec. Microbiol. 80, 1137 (2011) http://dx.doi.org/10.1111/j.1365-2958.2011.07652.x[Crossref]
  • [12] K.C. Keiler, Curr. Opin. Microbiol. 14, 155 (2011) http://dx.doi.org/10.1016/j.mib.2011.01.009[Crossref]
  • [13] K. Nevo-Dinur, S. Govindarajan, O. Amster-Choder, Trends Genet. 28, 314 (2012) http://dx.doi.org/10.1016/j.tig.2012.03.008[Crossref]
  • [14] D.Z. Rudner, R. Losick, Cold Spring Harb. Perspect. Biol. 2, a000307 (2010) http://dx.doi.org/10.1101/cshperspect.a000307[Crossref]
  • [15] E. Evguenieva-Hackenberg, V. Roppelt, C. Lassek, G. Klug, RNA Biol. 8, 49 (2011) http://dx.doi.org/10.4161/rna.8.1.14066[Crossref]
  • [16] T. Misteli, Histochem. Cell Biol. 129, 5 (2008) http://dx.doi.org/10.1007/s00418-007-0355-x[Crossref]
  • [17] J.T. Mika, B. Poolman, Curr. Opin. Biotechnol. 22, 117 (2011) http://dx.doi.org/10.1016/j.copbio.2010.09.009[Crossref]
  • [18] M. Kumar, M.S. Mommer, V. Sourjik, Biophys. J. 98, 552 (2010) http://dx.doi.org/10.1016/j.bpj.2009.11.002[Crossref]
  • [19] S. Saberi, E. Emberly, PLoS Comput. Biol. 6, e1000986 (2010) http://dx.doi.org/10.1371/journal.pcbi.1000986[Crossref]
  • [20] S. Saberi, E. Emberly, PLoS One 8, e64075 (2013) http://dx.doi.org/10.1371/journal.pone.0064075[Crossref]
  • [21] A.-S. Coquel et al., PLoS Comput. Biol. 9, e1003038 (2013) http://dx.doi.org/10.1371/journal.pcbi.1003038[Crossref]
  • [22] T.E. Kuhlman, E.C. Cox, Phys. Rev. E 88, 022701 (2013) http://dx.doi.org/10.1103/PhysRevE.88.022701[Crossref]
  • [23] V.P. Zhdanov, Cent. Eur. J. Phys. 10, 533 (2012) http://dx.doi.org/10.2478/s11534-012-0011-5[Crossref]
  • [24] O. Pulkkinen, R. Metzler, Phys. Rev. Lett. 110, 198101 (2013) http://dx.doi.org/10.1103/PhysRevLett.110.198101[Crossref]
  • [25] V.P. Zhdanov, Chem. Phys. Lett. 458, 247 (2008) http://dx.doi.org/10.1016/j.cplett.2008.03.047[Crossref]
  • [26] P. Rashkov, B.A. Schmitt, L. Sogaard-Andersen, P. Lenz, S. Dahlke, Bull. Math. Biol. 74, 2183 (2012) http://dx.doi.org/10.1007/s11538-012-9752-y[Crossref]
  • [27] M. Kaern, T.C. Elston, W.J. Blake, J.J. Collins, Nature Rev. Genet. 6, 451 (2005) http://dx.doi.org/10.1038/nrg1615[Crossref]
  • [28] A.M. Morris, M.A. Watzky, R.G. Finke, Biochim. Biophys. Acta 1794, 375 (2009) http://dx.doi.org/10.1016/j.bbapap.2008.10.016[Crossref]
  • [29] C.J. Roberts, J. Phys. Chem. B 107, 1194 (2003) http://dx.doi.org/10.1021/jp026827s[Crossref]
Typ dokumentu
Bibliografia
Identyfikatory
Identyfikator YADDA
bwmeta1.element.-psjd-doi-10_2478_s11534-014-0486-3
JavaScript jest wyłączony w Twojej przeglądarce internetowej. Włącz go, a następnie odśwież stronę, aby móc w pełni z niej korzystać.