PL EN


Preferencje help
Widoczny [Schowaj] Abstrakt
Liczba wyników
Czasopismo
2013 | 11 | 12 | 1653-1661
Tytuł artykułu

Quantifying the sorting efficiency of self-propelled run-and-tumble swimmers by geometrical ratchets

Treść / Zawartość
Warianty tytułu
Języki publikacji
EN
Abstrakty
EN
Suitable asymmetric microstructures can be used to control the direction of motion in microorganism populations. This rectification process makes it possible to accumulate swimmers in a region of space or to sort different swimmers. Here we study numerically how the separation process depends on the specific motility strategies of the microorganisms involved. Crucial properties such as the separation efficiency and the separation time for two bacterial strains are precisely defined and evaluated. In particular, the sorting of two bacterial populations inoculated in a box consisting of a series of chambers separated by columns of asymmetric obstacles is investigated. We show how the sorting efficiency is enhanced by these obstacles and conclude that this kind of sorting can be efficiently used even when the involved populations differ only in one aspect of their swimming strategy.
Słowa kluczowe
Wydawca

Czasopismo
Rocznik
Tom
11
Numer
12
Strony
1653-1661
Opis fizyczny
Daty
wydano
2013-12-01
online
2013-12-20
Twórcy
  • Département de Physique, Université de Liège, B-4000, Sart Tilman, Belgium, asilhanek@ulg.ac.be
  • Facultad de Matemática, Astronomía y Física, Universidad Nacional de Córdoba, X5000HUA, Córdoba, Argentina, hnm0108@famaf.unc.edu.ar
Bibliografia
  • [1] E. E. Keaveny, S. W. Walker, M. J. Shelley, Nano Lett. 13, 531 (2013) http://dx.doi.org/10.1021/nl3040477[Crossref]
  • [2] G. Mahmud et al., Nature Phys. 5, 606 (2009) http://dx.doi.org/10.1038/nphys1306[Crossref]
  • [3] K. Konstantopoulus, P. Wu, D. Wirtz, Biophys. J. 104, 279 (2013) http://dx.doi.org/10.1016/j.bpj.2012.12.016[Crossref]
  • [4] R. Peng, X. Yao, J. Ding, Biomaterials 32, 8048 (2011) http://dx.doi.org/10.1016/j.biomaterials.2011.07.035[Crossref]
  • [5] P. Galajda, J. Keymer, P. Chaikin, R. Austin, J. Bacteriol. 189, 8704 (2007) http://dx.doi.org/10.1128/JB.01033-07[Crossref]
  • [6] S. Y. Kim et al., J. Micromech. Microeng. 20, 0950061 (2010)
  • [7] J. Elgeti, U. B. Kaupp, G. Gompper, Biophys. J. 99, 1018 (2010) http://dx.doi.org/10.1016/j.bpj.2010.05.015[Crossref]
  • [8] P. Denissenko, V. Kantsler, D. J. Smith, J. Kirkman-Brown, Proc. Natl. Acad. Sci. USA 109, 8007 (2012) http://dx.doi.org/10.1073/pnas.1202934109[Crossref]
  • [9] T. M. Squires, S. R. Quake, Rev. Mod. Phys. 77, 977 (2005) http://dx.doi.org/10.1103/RevModPhys.77.977[Crossref]
  • [10] K. Leung et al., Proc. Natl. Acad. Sci. USA 109, 20 (2012)
  • [11] L. G. Wilson et al., Phys. Rev. Lett. 106, 018101 (2011) http://dx.doi.org/10.1103/PhysRevLett.106.018101[Crossref]
  • [12] E. Altshuler et al., Soft Matter. 9, 1864 (2013) http://dx.doi.org/10.1039/c2sm26460a[Crossref]
  • [13] V. Kantsler, J. Dunkel, M. Polin, R. E. Goldstein, Proc. Natl. Acad. Sci. USA 110, 4 (2013) http://dx.doi.org/10.1073/pnas.1218423110[Crossref]
  • [14] G. Lambert, D. Liao, R. H. Austin, Phys. Rev. Lett. 104, 168102 (2010) http://dx.doi.org/10.1103/PhysRevLett.104.168102[Crossref]
  • [15] J. A. Drocco, C. J. O. Reichhardt, C. Reichhardt, Phys. Rev. E 85, 056102 (2012) http://dx.doi.org/10.1103/PhysRevE.85.056102[Crossref]
  • [16] C. A. Condat, J. Jäckle, S. A. Menchón. Phys. Rev. E 72, 021909, (2005) http://dx.doi.org/10.1103/PhysRevE.72.021909[Crossref]
  • [17] F. Peruani, L. G. Morelli, Phys. Rev. Lett. 99, 010602 (2007) http://dx.doi.org/10.1103/PhysRevLett.99.010602[Crossref]
  • [18] V. Garcia, M. Birbaumer, F Schweitzer, Eur. Phys. J. B 82, 235 (2011) http://dx.doi.org/10.1140/epjb/e2011-20425-2[Crossref]
  • [19] M. E. Di Salvo, C. A. Condat, Phys. Rev. E 86, 061907 (2012) http://dx.doi.org/10.1103/PhysRevE.86.061907[Crossref]
  • [20] G. Grégoire, H. Chaté, Phys. Rev. Lett. 92, 025702 (2004) http://dx.doi.org/10.1103/PhysRevLett.92.025702[Crossref]
  • [21] E. Bertin, M. Droz, G. Grégoire, J. Phys. A 42, 445001 (2009) http://dx.doi.org/10.1088/1751-8113/42/44/445001[Crossref]
  • [22] C. A. Weber et al., Phys. Rev. Lett. 110, 208001 (2013) http://dx.doi.org/10.1103/PhysRevLett.110.208001[Crossref]
  • [23] P. Romanczuk, L. Schimansky-Geier, Phys. Rev. Lett. 106, 230601 (2011) http://dx.doi.org/10.1103/PhysRevLett.106.230601[Crossref]
  • [24] B. S. Cho, T. G. Schuster, X. M. Zhu, D. Chang, G. D. Smith, S. Takayama, Anal. Chem. 75, 4671 (2003)
  • [25] S. E. Hulme et al., Lab on a Chip 8, 1888 (2008) http://dx.doi.org/10.1039/b809892a[Crossref]
  • [26] W. Yang, V. R. Misko, K. Nelissen, M. Kong, F. M. Peeters, Soft Matter 8, 5175 (2012) http://dx.doi.org/10.1039/c2sm07382j[Crossref]
  • [27] L. Bogunovic, R. Eichhorn, J. Regtmeier, D. Anselmetti, P. Reimann, Soft Matter 8, 3900 (2012) http://dx.doi.org/10.1039/c2sm07053g[Crossref]
  • [28] J. Voldman, Nature Phys. 5, 536 (2009) http://dx.doi.org/10.1038/nphys1349[Crossref]
  • [29] H. C. Berg, Random Walks in Biology (Princeton University Press, Princeton, New Jersey, 1993)
  • [30] H. C. Berg, E. coli in motion (Springer, New York, 2004)
  • [31] H. C. Berg, D. A. Brown, Nature 239, 500 (1972) http://dx.doi.org/10.1038/239500a0[Crossref]
  • [32] G. M. Barbara, J. G. Mitchell, FEMS Microbiol. Ecol. 44, 79 (2003) http://dx.doi.org/10.1111/j.1574-6941.2003.tb01092.x[Crossref]
  • [33] L. Xie, T. Altindal, S. Chattopadhyay, X. L. Wu, Proc. Natl. Acad. Sci. USA 108, 22462251 (2011)
  • [34] M. Wan, C. J. O. Reichhardt, Z. Nussinov, C. Reichhardt, Phys. Rev. Lett. 101, 018102 (2008) http://dx.doi.org/10.1103/PhysRevLett.101.018102[Crossref]
  • [35] J. Tailleur, M. E. Cates, Eur. Phys. Lett. 86, 60002 (2009) http://dx.doi.org/10.1209/0295-5075/86/60002[Crossref]
  • [36] I. Berdakin et al., Phys. Rev. E 87, 052702 (2013) http://dx.doi.org/10.1103/PhysRevE.87.052702[Crossref]
  • [37] P. D. Frymier, R. M. Ford, H. C. Berg, P. T. Cummingssi, Proc. Natl. Acad. Sci. USA 92,6195-9 (1995)
  • [38] G. Li, J. X. Tang, Phys. Rev. Lett. 103, 078101 (2009) http://dx.doi.org/10.1103/PhysRevLett.103.078101[Crossref]
  • [39] G. Miño et al., Phys. Rev. Lett. 106, 0481021 (2011)
  • [40] K. Drescher, J. Dunkel, L. H. Cisneros, S. Ganguly, R. E. Goldstein, Proc. Natl. Acad. Sci. USA 108, 10940 (2011) http://dx.doi.org/10.1073/pnas.1019079108[Crossref]
  • [41] A. Costanzo, R. Di Leonardo, G. Ruocco, L. Angelani, J. Phys.: Condens. Matter 24, 065101 (2012)
  • [42] T. Vicsek, A. Czirok, E. Ben-Jacob, I. Cohen, O. Shochet, Phys. Rev. Lett. 75, 1226 (1995) http://dx.doi.org/10.1103/PhysRevLett.75.1226[Crossref]
  • [43] G. Grégoire, H. Chaté, Y. Tu, Physica D 181, 157 (2003). http://dx.doi.org/10.1016/S0167-2789(03)00102-7[Crossref]
  • [44] H. Chaté, F. Ginelli, G. Grégoire, F. Raynaud, Phys. Rev. E 77, 046113 (2008) http://dx.doi.org/10.1103/PhysRevE.77.046113[Crossref]
  • [45] E. Bertin, M. Droz, G. Grégoire, Phys. Rev. E 74, 022101 (2006) http://dx.doi.org/10.1103/PhysRevE.74.022101[Crossref]
  • [46] T. Ihle, Phys. Rev. E 83, 030901(R) (2011). http://dx.doi.org/10.1103/PhysRevE.83.030901[Crossref]
  • [47] R. Grossmann, L. Schimansky-Geier, P. Romanczuk, New J. Phys. 14, 073033 (2012) http://dx.doi.org/10.1088/1367-2630/14/7/073033[Crossref]
  • [48] P. Romanczuk, M. Baer, W. Ebeling, B. Lindner, L. Schimansky-Geier, Eur. Phys. J. Special Topics 202, 1 (2012) http://dx.doi.org/10.1140/epjst/e2012-01529-y[Crossref]
  • [49] M. Polin, I. Tuval, K. Drescher, J. P. Gollub, R. E. Goldstein, Science 325, 487 (2009) http://dx.doi.org/10.1126/science.1172667[Crossref]
Typ dokumentu
Bibliografia
Identyfikatory
Identyfikator YADDA
bwmeta1.element.-psjd-doi-10_2478_s11534-013-0300-7
JavaScript jest wyłączony w Twojej przeglądarce internetowej. Włącz go, a następnie odśwież stronę, aby móc w pełni z niej korzystać.