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2014 | 12 | 10 | 977-993
Tytuł artykułu

DNA molecules site-specific immobilization and their applications

Treść / Zawartość
Warianty tytułu
Języki publikacji
EN
Abstrakty
EN
In addition to its role as a carrier of genetic information, DNA has been recognized as a construction material for the assembly of different objects and structural arrangements with nanoscale features. As a result of DNA’s self-recognition properties (based on the specific base-pairing of G-C and T-A), monolayer films of nucleic acids on solid supports have attracted an escalating attentions. Recently, numerous novel materials based on two-dimensional (2D) and three-dimensional (3D) DNA structures have been reported, which extends their utility to a large number of appliations. This review paper intends to be a new and comprehensive overview of recent strategies to site-specifically immobilized DNA on various materials, including carbonaceous substances, gold, and silica substrate, emphasizing the applications of site-specific DNA nanostructure-based devices for diagnostic, bioanalytical, food safety and environmental monitoring. Additionally, an up-to-date perspective is proposed at the end of this review.
Słowa kluczowe
Wydawca

Czasopismo
Rocznik
Tom
12
Numer
10
Strony
977-993
Opis fizyczny
Daty
wydano
2014-10-01
online
2014-05-15
Twórcy
autor
  • Zhejiang Province Key Lab of Mariculture & Enhancement
Bibliografia
  • [1] D. J. Graves, Trends Biotechnol. 17, 127 (1999) http://dx.doi.org/10.1016/S0167-7799(98)01241-4[Crossref]
  • [2] M. Schena, R.A. Heller, T.P. Theriault, K. Konrad, E. Lachenmeier, R.W. Davis, Trends Biotechnol. 16, 301 (1998) http://dx.doi.org/10.1016/S0167-7799(98)01219-0[Crossref]
  • [3] N. C. Seeman, J. Theor. Biol. 99, 237 (1982) http://dx.doi.org/10.1016/0022-5193(82)90002-9[Crossref]
  • [4] N. C. Seeman, Nature 421, 427 (2003) http://dx.doi.org/10.1038/nature01406[Crossref]
  • [5] V. Z. Singh, M. Zharnikov, A. Gulinoc, T. Gupta, J. Mater. Chem. 21, 10602 (2011) http://dx.doi.org/10.1039/c0jm04359a[Crossref]
  • [6] B. Sacca, C.M. Niemeyer, Angew Chem. Int. Ed. Engl. 51, 58 (2012) http://dx.doi.org/10.1002/anie.201105846[Crossref]
  • [7] D. Ge, X. Wang, K. Williams, R. Levicky, Langmuir 28, 8446 (2012) http://dx.doi.org/10.1021/la301165a[Crossref]
  • [8] A. H. Wu, J.J. Sun, R.J. Zheng, H.H. Yang, G.N. Chen, Talanta 81, 934 (2010) http://dx.doi.org/10.1016/j.talanta.2010.01.040[Crossref]
  • [9] A. Bonanni, M. del Valle, Anal. Chim. Acta 678, 7 (2010) http://dx.doi.org/10.1016/j.aca.2010.08.022[Crossref]
  • [10] F. Yan, H. Tang, Expert review of molecular diagnostics 10, 547 (2010) http://dx.doi.org/10.1586/erm.10.50[Crossref]
  • [11] X. C. Dong, Y.M. Shi, W. Huang, P. Chen, L.J. Li, Adv. Mater. 22, 1649 (2010) http://dx.doi.org/10.1002/adma.200903645[Crossref]
  • [12] N. J. Kybert, M.B. Lerner, J.S. Yodh, G. Preti, A.T.C. Johnson, Acs Nano 7, 2800 (2013) http://dx.doi.org/10.1021/nn400359c[Crossref]
  • [13] A. A. Ensafi, B. Rezaei, M. Amini, E. Heydari-Bafrooei, Talanta 88, 244 (2012) http://dx.doi.org/10.1016/j.talanta.2011.10.038[Crossref]
  • [14] F. Lagarde, N. Jaffrezic-Renault, In: V. Somerse (Ed.), Environmental Biosensors (InTech, China, 2011)
  • [15] W. Wang, Y. Wang, L. Tu, T. Klein, Y.L. Feng, J.P. Wang, IEEE Transactions Magn. 49, 296 (2013) http://dx.doi.org/10.1109/TMAG.2012.2224327[Crossref]
  • [16] F. R.R. Teles, L.R. Fonseca, Talanta 77, 606 (2008). http://dx.doi.org/10.1016/j.talanta.2008.07.024[Crossref]
  • [17] H. Pei, X.L. Zuo, D. Pan, J.Y. Shi, Q. Huang, C.H. Fan, NPG Asia Materials 5, 1 (2013)
  • [18] C. Wittmann, S. Alegret, Immobilisation of DNA on chips (Springer, Berlin, New York, 2005) http://dx.doi.org/10.1007/b105173[Crossref]
  • [19] D. S. Dandy, P. Wu, D.W. Grainger, Proc. Natl. Acad. Sci. USA 104, 8223 (2007) http://dx.doi.org/10.1073/pnas.0606054104[Crossref]
  • [20] M. Glazer, J.A. Fidanza, G.H. McGall, M.O. Trulson, J.E. Forman, A. Suseno, C.W. Frank, Anal. Biochem. 358, 225 (2006) http://dx.doi.org/10.1016/j.ab.2006.07.042[Crossref]
  • [21] J. B. Fiche, A. Buhot, R. Calemczuk, T. Livache, Biophys. J. 92, 935 (2007) http://dx.doi.org/10.1529/biophysj.106.097790[Crossref]
  • [22] J. H. Watterson, P.A.E. Piunno, C.C. Wust, U.J. Krull, Langmuir 16, 4984 (2000) http://dx.doi.org/10.1021/la991508m[Crossref]
  • [23] M. S. Shchepinov, S.C. CaseGreen, E.M. Southern, Nucleic Acids Res. 25, 1155 (1997) http://dx.doi.org/10.1093/nar/25.6.1155[Crossref]
  • [24] E. L.S. Wong, E. Chow, J.J. Gooding, Langmuir 21, 6957 (2005) http://dx.doi.org/10.1021/la050725m[Crossref]
  • [25] P. Gong, C.Y. Lee, L.J. Gamble, D.G. Castner, D.W. Grainger, Anal. Chem. 78, 3326 (2006) http://dx.doi.org/10.1021/ac052138b[Crossref]
  • [26] J. H.C. Lee, Y.K. Choi, H.J. Kim, R.H. Scheicher, J.H. Cho, J. Phys.Chem. C 117, 13435 (2013) http://dx.doi.org/10.1021/jp402403f[Crossref]
  • [27] M. Malmqvist, Nature 361, 186 (1993) http://dx.doi.org/10.1038/361186a0[Crossref]
  • [28] H. O. Ham, Z. Liu, K.H. Lau, H. Lee, P.B. Messersmith, Angew Chem. Int. Ed. Engl. 50, 732 (2011) http://dx.doi.org/10.1002/anie.201005001[Crossref]
  • [29] H. T. Ngo, H.N. Wang, A.M. Fales, T. Vo-Dinh, Anal. Chem. 85, 6378 (2013) http://dx.doi.org/10.1021/ac400763c[Crossref]
  • [30] M. Yousef Elahi, S.Z. Bathaie, S.H. Kazemi, M.F. Mousavi, Anal. Biochem. 411, 176 (2011) http://dx.doi.org/10.1016/j.ab.2011.01.006[Crossref]
  • [31] H. K. Tran, K.L. Killops, L.M. Campos, Soft Matter. 9, 6578 (2013) http://dx.doi.org/10.1039/c3sm00149k[Crossref]
  • [32] H. Yoshinaga, K. Nakano, N. Soh, R. Ishimatsu, T. Imato, Anal. Sci. 28, 1059 (2012) http://dx.doi.org/10.2116/analsci.28.1059[Crossref]
  • [33] L. K. Gifford, I.E. Sendroiu, R.M. Corn, A. Luptak, J. Am. Chem. Soc. 132, 9265 (2010) http://dx.doi.org/10.1021/ja103043p[Crossref]
  • [34] T. H. Seefeld, A.R. Halpern, R.M. Corn, J. Am. Chem. Soc. 134, 12358 (2012) http://dx.doi.org/10.1021/ja304187r[Crossref]
  • [35] L. E. Valenti, E. Herrera, M.F. Stragliotto, V.L. Martins, R.M. Torresi, C.E. Giacomelli, ACS Symposium Series (Oxford University Press, American Chemical Society, Washington, DC, 2012)
  • [36] C. E. Hoyle, C.N. Bowman, Angew Chem. Int. Ed. Engl. 49, 1540 (2010) http://dx.doi.org/10.1002/anie.200903924[Crossref]
  • [37] J. Escorihuela, M.J. Banuls, R. Puchades, A. Maquieira, Chem. Commun. (Camb) 48, 2116 (2012) http://dx.doi.org/10.1039/c2cc17321b[Crossref]
  • [38] A. P. Eskelinen, A. Kuzyk, T.K. Kaltiaisenaho, M.Y. Timmermans, A.G. Nasibulin, E.I. Kauppinen, P. Torma, Small 7, 746 (2011) http://dx.doi.org/10.1002/smll.201001750[Crossref]
  • [39] S. Manohar, A.R. Mantz, K.E. Bancroft, C.Y. Hui, A. Jagota, D.V. Vezenov, Nano Lett. 8, 4365 (2008) http://dx.doi.org/10.1021/nl8022143[Crossref]
  • [40] A. A. Ensafi, E. Heydari-Bafrooei, M. Amini, Biosens. Bioelectron. 31, 376 (2012) http://dx.doi.org/10.1016/j.bios.2011.10.050[Crossref]
  • [41] O. Boulanouar, M. Fromm, A.D. Bass, P. Cloutier, L. Sanche, J. Chem. Phys. 139, 055104 (2013) http://dx.doi.org/10.1063/1.4817323[Crossref]
  • [42] X. Tan, T. Chen, X. Xiong, Y. Mao, G. Zhu, E. Yasun, C. Li, Z. Zhu, W. Tan, Anal. Chem. 84, 8622 (2012) http://dx.doi.org/10.1021/ac301657f[Crossref]
  • [43] Z. Tang, H. Wu, J.R. Cort, G.W. Buchko, Y. Zhang, Y. Shao, I.A. Aksay, J. Liu, Y. Lin, Small 6, 1205 (2010) http://dx.doi.org/10.1002/smll.201000024[Crossref]
  • [44] E. Dubuisson, Z. Yang, K.P. Loh, Anal. Chem. 83, 2452 (2011) http://dx.doi.org/10.1021/ac102431d[Crossref]
  • [45] T. G. Premkumara, K.E. Geckeler, Progress in Polymer Science 37, 515 (2012) http://dx.doi.org/10.1016/j.progpolymsci.2011.08.003[Crossref]
  • [46] D. Roxbury, J. Mittal, A. Jagota, Nano Lett. 12, 1464 (2012) http://dx.doi.org/10.1021/nl204182b[Crossref]
  • [47] D. Roxbury, A. Jagota, J. Mittal, J. Phys. Chem. B 117, 132 (2013) http://dx.doi.org/10.1021/jp309523a[Crossref]
  • [48] J. H. Kim, M. Kataoka, Y.C. Jung, Y.I. Ko, K. Fujisawa, T. Hayashi, Y.A. Kim, M. Endo, ACS Appl. Mater. Interfaces 5, 4150 (2013)
  • [49] D. P. Kai, M.P. Prabhakaran, G. Jin, S. Ramakrishna, J. Mater. Chem. B 1, 2305 (2013) http://dx.doi.org/10.1039/c3tb00151b[Crossref]
  • [50] S. Sorgenfrei, C.Y. Chiu, R.L. Gonzalez, Jr., Y.J. Yu, P. Kim, C. Nuckolls, K.L. Shepard, Nat. Nanotechnol. 6, 126 (2011) http://dx.doi.org/10.1038/nnano.2010.275[Crossref]
  • [51] K. W. Sara Iliafar, S. Manohar, A. Jagota, D. Vezenov, J. Phys. Chem. C 116, 13896 (2012) http://dx.doi.org/10.1021/jp212326x[Crossref]
  • [52] M. Hegner, P. Wagner, G. Semenza, Febs. Lett. 336, 452 (1993) http://dx.doi.org/10.1016/0014-5793(93)80854-N[Crossref]
  • [53] M. R. Lockett, M.F. Phillips, J.L. Jarecki, D. Peelen, L.M. Smith, Langmuir 24, 69 (2008) http://dx.doi.org/10.1021/la702493u[Crossref]
  • [54] S. Shimron, A. Cecconello, C.H. Lu, I. Willner, Nano Lett. 13, 3791 (2013) http://dx.doi.org/10.1021/nl4017539[Crossref]
  • [55] C. Huang, T. Stakenborg, Y. Cheng, F. Colle, T. Steylaerts, K. Jans, P. Van Dorpe, L. Lagae, Biosens. Bioelectron. 26, 3121 (2011) http://dx.doi.org/10.1016/j.bios.2010.12.008[Crossref]
  • [56] L. T.R. Banner, A. Richter, E. Pinkhassik, Surf. Interface Anal. 41, 49 (2009) http://dx.doi.org/10.1002/sia.2977[Crossref]
  • [57] C. Wang, X.M. Jia, C. Jiang, G.N. Zhuang, Q. Yan, S.J. Xiao, Analyst 137, 4539 (2012) http://dx.doi.org/10.1039/c2an35417a[Crossref]
  • [58] X. Lv, L. Chen, H. Zhang, J. Mo, F. Zhong, C. Lv, J. Ma, Z. Jia, Biosens. Bioelectron. 39, 329 (2013) http://dx.doi.org/10.1016/j.bios.2012.07.047[Crossref]
  • [59] A. V. Ladik, F.M. Geiger, S.R. Walter, Nanoscape 7, 19 (2010)
  • [60] J. M. Yun, K.N. Kim, J.Y. Kim, D.O. Shin, W.J. Lee, S.H. Lee, M. Lieberman, S.O. Kim, Angew Chem. Int. Ed. Engl. 51, 912 (2012) http://dx.doi.org/10.1002/anie.201106198[Crossref]
  • [61] B. Ding, H. Wu, W. Xu, Z. Zhao, Y. Liu, H. Yu, H. Yan, Nano Lett. (2010)
  • [62] J. J. Schmied, C. Forthmann, E. Pibiri, B. Lalkens, P. Nickels, T. Liedl, P. Tinnefeld, Nano Lett. 13, 781 (2013) http://dx.doi.org/10.1021/nl304492y[Crossref]
  • [63] S. J. Kim, B. Kim, J. Jung, D.H. Yoon, J. Lee, S.H. Park, H.J. Kim, Appl. Phys. Lett. 100 (2012).
  • [64] T.M. Lee, Sensors 8, 5535 (2008) http://dx.doi.org/10.3390/s8095535[Crossref]
  • [65] E. Ozkumur, S. Ahn, A. Yalcin, C.A. Lopez, E. Cevik, R.J. Irani, C. DeLisi, M. Chiari, M.S. Unlu, Biosens. Bioelectron. 25, 1789 (2010) http://dx.doi.org/10.1016/j.bios.2009.12.032[Crossref]
  • [66] A. H. Wu, J.J. Sun, R.J. Zheng, H.H. Yang, G.N. Chen, Talanta 81, 934 (2010) http://dx.doi.org/10.1016/j.talanta.2010.01.040[Crossref]
  • [67] A. V. Bonannia, M.D. Valle, Anal. Chim. Acta 678, 7 (2010) http://dx.doi.org/10.1016/j.aca.2010.08.022[Crossref]
  • [68] K. M. Millan, S.R. Mikkelsen, Anal. Chem. 65, 2317 (1993) http://dx.doi.org/10.1021/ac00065a025[Crossref]
  • [69] J. T. Wallmark, Field-effect transistor, U.S. Patent No. 2,900,531, 1959)
  • [70] F. Yan, H. Tang, Expert review of molecular diagnostics 10, 547 (2010) http://dx.doi.org/10.1586/erm.10.50[Crossref]
  • [71] X. Dong, Y. Shi, W. Huang, P. Chen, L.J. Li, Adv. Mater. 22, 1649 (2010) http://dx.doi.org/10.1002/adma.200903645[Crossref]
  • [72] L. Kergoat, L. Herlogsson, D. Braga, B. Piro, M.C. Pham, X. Crispin, M. Berggren, G. Horowitz, Adv Mater 22, 2565 (2010) http://dx.doi.org/10.1002/adma.200904163[Crossref]
  • [73] B. P. Loig Kergoat, M. Berggren, M.-Ch. Pham, A. Yassar, G. Horowitz, Org. Electron 13, 1
  • [74] P. Lin, X. Luo, I.M. Hsing, F. Yan, Adv Mater 23, 4035 (2011) http://dx.doi.org/10.1002/adma.201102017[Crossref]
  • [75] D. Fu, H. Okimoto, C.W. Lee, T. Takenobu, Y. Iwasa, H. Kataura, L.J. Li, Adv. Mater. 22, 4867 (2010) http://dx.doi.org/10.1002/adma.201002305[Crossref]
  • [76] Y. Cao, S. Zhu, J. Yu, X. Zhu, Y. Yin, G. Li, Anal. Chem. 84, 4314 (2012) http://dx.doi.org/10.1021/ac203401h[Crossref]
  • [77] B. R. Coad, T. Scholz, K. Vasilev, J.D. Hayball, R.D. Short, H.J. Griesser, ACS Appl. Mater. Interfaces 4, 2455 (2012) http://dx.doi.org/10.1021/am300128n[Crossref]
  • [78] K. Furukawa, Y. Ueno, E. Tamechika, H. Hibino, J. Mater. Chem. B 1, 1119 (2013) http://dx.doi.org/10.1039/c2tb00167e[Crossref]
  • [79] F. Pillet, A. Sanchez, C. Formosa, M. Severac, E. Trevisiol, J.Y. Bouet, V. Anton Leberre, Biosens. Bioelectron. 43, 148 (2013) http://dx.doi.org/10.1016/j.bios.2012.12.023[Crossref]
  • [80] P. N. Bartlett, Bioelectrochemistry: fundamentals, experimental techniques and applications (John Wiley & Sons, Chichester, England, Hoboken, NJ, 2008) http://dx.doi.org/10.1002/9780470753842[Crossref]
  • [81] N. J. Kybert, M.B. Lerner, J.S. Yodh, G. Preti, A.T. Johnson, ACS Nano 7, 2800 (2013) http://dx.doi.org/10.1021/nn400359c[Crossref]
  • [82] European Commission, Notification of new chemical substances in accordance with directive 67/548/ EEC on the classification, packaging, and labelling of dangerous substances, EINECS corrections, (European Commission, Bernan Associates distributor, Luxembourg Lanham, MD, 1997)
  • [83] A. A. Ensafi, B. Rezaei, M. Amini, E. Heydari-Bafrooei, Talanta 88, 244 (2012) http://dx.doi.org/10.1016/j.talanta.2011.10.038[Crossref]
  • [84] T. G. Drummond, M.G. Hill, J.K. Barton, Nat. Biotechnol. 21, 1192 (2003) http://dx.doi.org/10.1038/nbt873[Crossref]
  • [85] M. J. Heller, Annual Review of Biomedical Engineering 4, 129 (2002) http://dx.doi.org/10.1146/annurev.bioeng.4.020702.153438[Crossref]
  • [86] L. Civit, A. Fragoso, C.K. O’Sullivan, Electrochem. Commun. 12, 1045 (2010) http://dx.doi.org/10.1016/j.elecom.2010.05.020[Crossref]
  • [87] N. Phares, R.J. White, K.W. Plaxco, Anal. Chem. 81, 1095 (2009) http://dx.doi.org/10.1021/ac8021983[Crossref]
  • [88] X. Liu, R. Aizen, R. Freeman, O. Yehezkeli, I. Willner, ACS Nano 6, 3553 (2012) http://dx.doi.org/10.1021/nn300598q[Crossref]
  • [89] A. E. Singh, H. Eksiri, Y.G. Yingling, Polymer Physics 49, 1563 (2011) http://dx.doi.org/10.1002/polb.22349[Crossref]
  • [90] S. Nakano, T. Kanzaki, M. Nakano, D. Miyoshi, N. Sugimoto, Anal. Chem. 83, 6368 (2011) http://dx.doi.org/10.1021/ac201312d[Crossref]
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